RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 PXMP2Q9NR77 195 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 PDGFCQ9NRA1 345 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
GCN1-202ENST00000547263 CFBP00751 764 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 IFNAR1P17181 557 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 SMPD1P17405 629 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 ADCYAP1R1P41586 468 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 METAP2P50579 478 aaKnown RBP eCLIP12.63□□□□□ -0.394e-9■■■■■ 37.6
GCN1-202ENST00000547263 PKN1Q16512 942 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
GCN1-202ENST00000547263 PPP1R18Q6NYC8 613 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 VSIG10LQ86VR7 867 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 FBXO16Q8IX29 292 aaPredicted RBP12.63□□□□□ -0.39
GCN1-202ENST00000547263 RMDN3Q96TC7 470 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 KIF2CQ99661 725 aa12.63□□□□□ -0.39
GCN1-202ENST00000547263 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
GCN1-202ENST00000547263 MYADML2A6NDP7 307 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 B4DLN1 442 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 GCOM1H8Y6P7 765 aaPredicted RBP12.62□□□□□ -0.39
GCN1-202ENST00000547263 PRPF3O43395 683 aaKnown RBP12.62□□□□□ -0.39
GCN1-202ENST00000547263 RGS20O76081 388 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 PGK1P00558 417 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 NR3C2P08235 984 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
GCN1-202ENST00000547263 TNFAIP2Q03169 654 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 PGM5Q15124 567 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 GJC2Q5T442 439 aaPredicted RBP12.62□□□□□ -0.39
GCN1-202ENST00000547263 WWC2Q6AWC2 1192 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 RNF180Q86T96 592 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 MPHOSPH6Q99547 160 aaKnown RBP12.62□□□□□ -0.39
GCN1-202ENST00000547263 RNF26Q9BY78 433 aaPredicted RBP12.62□□□□□ -0.39
GCN1-202ENST00000547263 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
GCN1-202ENST00000547263 SEC63Q9UGP8 760 aaKnown RBP12.62□□□□□ -0.39
GCN1-202ENST00000547263 SCN10AQ9Y5Y9 1956 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 LTBP2Q14767 1821 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 ESYT2A0FGR8 921 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 STXBP3O00186 592 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
GCN1-202ENST00000547263 EIF3JO75822 258 aaKnown RBP12.61□□□□□ -0.39
GCN1-202ENST00000547263 ARIH2O95376 493 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 HOXA13P31271 388 aaPredicted RBP12.61□□□□□ -0.39
GCN1-202ENST00000547263 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
GCN1-202ENST00000547263 CLK2P49760 499 aaKnown RBP12.61□□□□□ -0.39
GCN1-202ENST00000547263 IRX5P78411 483 aaPredicted RBP12.61□□□□□ -0.39
GCN1-202ENST00000547263 PDE4DQ08499 809 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 PFKFB3Q16875 520 aaPredicted RBP12.61□□□□□ -0.39
GCN1-202ENST00000547263 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 IL31RAQ8NI17 732 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 SCFD2Q8WU76 684 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 PRO3102Q9H379 93 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
GCN1-202ENST00000547263 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
GCN1-202ENST00000547263 A0A1W2PQ45 241 aaPredicted RBP12.6□□□□□ -0.39
GCN1-202ENST00000547263 A0A1W2PQY0 241 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 hCG_1642624A0A1W2PR95 340 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 KBTBD13C9JR72 458 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 STAM2O75886 525 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 ICAM3P32942 547 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 MRPS9P82933 396 aaKnown RBP12.6□□□□□ -0.39
GCN1-202ENST00000547263 FGD1P98174 961 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 STXBP2Q15833 593 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 ARHGEF16Q5VV41 709 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 XRRA1Q6P2D8 792 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 SLC39A5Q6ZMH5 540 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 EEPD1Q7L9B9 569 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 SLC43A3Q8NBI5 491 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
GCN1-202ENST00000547263 INPP4AQ96PE3 977 aaPredicted RBP12.6□□□□□ -0.39
GCN1-202ENST00000547263 WDR11Q9BZH6 1224 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 ZMYND12Q9H0C1 365 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 V9GY48 417 aaPredicted RBP12.6□□□□□ -0.39
GCN1-202ENST00000547263 ELP1O95163 1332 aa12.6□□□□□ -0.39
GCN1-202ENST00000547263 A6NJR5 290 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 HOXD8P13378 290 aaPredicted RBP12.59□□□□□ -0.39
GCN1-202ENST00000547263 SCG2P13521 617 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 EIF2AK2P19525 551 aaKnown RBP12.59□□□□□ -0.39
GCN1-202ENST00000547263 PTGS1P23219 599 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 CDK7P50613 346 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 ACLYP53396 1101 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 TTLL4Q14679 1199 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 KCNA10Q16322 511 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 PCNX4Q63HM2 1172 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
GCN1-202ENST00000547263 PCSK9Q8NBP7 692 aaKnown RBP12.59□□□□□ -0.39
GCN1-202ENST00000547263 CRYGNQ8WXF5 182 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 PIBF1Q8WXW3 757 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
GCN1-202ENST00000547263 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
GCN1-202ENST00000547263 PSTPIP2Q9H939 334 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 DDX41Q9UJV9 622 aaKnown RBP12.59□□□□□ -0.39
GCN1-202ENST00000547263 TPCN1Q9ULQ1 816 aa12.59□□□□□ -0.39
GCN1-202ENST00000547263 MYH7BA7E2Y1 1941 aa12.58□□□□□ -0.39
GCN1-202ENST00000547263 PFKFB2O60825 505 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms