RNA–Protein interactions for RNA: ENST00000546911.5

LINC02396-201, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 3

Gene LINC02396, Length 300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-201ENST00000546911 RMDN3Q96TC7 470 aa11.36□□□□□ -0.59
LINC02396-201ENST00000546911 PRDM5Q9NQX1 630 aaPredicted RBP11.36□□□□□ -0.59
LINC02396-201ENST00000546911 A0A0U1RQG5 324 aaPredicted RBP11.35□□□□□ -0.59
LINC02396-201ENST00000546911 SOX1O00570 391 aaPredicted RBP11.35□□□□□ -0.59
LINC02396-201ENST00000546911 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC02396-201ENST00000546911 PQBP1O60828 265 aaKnown RBP11.35□□□□□ -0.59
LINC02396-201ENST00000546911 CABYRO75952 493 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 DDAH1O94760 285 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 CFBP00751 764 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 ITGB8P26012 769 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 EXOSC10Q01780 885 aaKnown RBP11.35□□□□□ -0.59
LINC02396-201ENST00000546911 CXCL17Q6UXB2 119 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 HOMER1Q86YM7 354 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 SCFD2Q8WU76 684 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 BADQ92934 168 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 NEK1Q96PY6 1258 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 TMEM39AQ9NV64 488 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
LINC02396-201ENST00000546911 CCDC69A6NI79 296 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 NR3C2P08235 984 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 TXNP10599 105 aaKnown RBP11.34□□□□□ -0.59
LINC02396-201ENST00000546911 KIF5BP33176 963 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 GNAQP50148 359 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 ITGA7Q13683 1181 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 STXBP2Q15833 593 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 ARHGEF16Q5VV41 709 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 CCDC62Q6P9F0 684 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 SRBD1Q8N5C6 995 aaKnown RBP11.34□□□□□ -0.59
LINC02396-201ENST00000546911 CTCFLQ8NI51 663 aaPredicted RBP11.34□□□□□ -0.59
LINC02396-201ENST00000546911 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 SEZ6LQ9BYH1 1024 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
LINC02396-201ENST00000546911 BAZ2BQ9UIF8 2168 aaKnown RBP11.33□□□□□ -0.6
LINC02396-201ENST00000546911 A6NJR5 290 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 EIF3JO75822 258 aaKnown RBP11.33□□□□□ -0.6
LINC02396-201ENST00000546911 ARIH2O95376 493 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 CD4P01730 458 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 NEFLP07196 543 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 CALM1P0DP23 149 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 CALM2P0DP24 149 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 CALM3P0DP25 149 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 RAG1P15918 1043 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 CPT1AP50416 773 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 TTLL4Q14679 1199 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 PPP2R5BQ15173 497 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 DHX32Q7L7V1 743 aaKnown RBP11.33□□□□□ -0.6
LINC02396-201ENST00000546911 SGMS1Q86VZ5 419 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 FAM126BQ8IXS8 530 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 FANCBQ8NB91 859 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 COPS5Q92905 334 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 LCTP09848 1927 aa11.33□□□□□ -0.6
LINC02396-201ENST00000546911 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
LINC02396-201ENST00000546911 TLR3O15455 904 aaKnown RBP11.32□□□□□ -0.6
LINC02396-201ENST00000546911 KPNA6O60684 536 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 TIMP1P01033 207 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 EIF2AK2P19525 551 aaKnown RBP11.32□□□□□ -0.6
LINC02396-201ENST00000546911 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
LINC02396-201ENST00000546911 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
LINC02396-201ENST00000546911 KRT32Q14532 448 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 SHHQ15465 462 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 LY6KQ17RY6 165 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 KCNB2Q92953 911 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
LINC02396-201ENST00000546911 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 TBX21Q9UL17 535 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
LINC02396-201ENST00000546911 PLEKHA8P1O95397 391 aa11.31□□□□□ -0.6
LINC02396-201ENST00000546911 MYL3P08590 195 aa11.31□□□□□ -0.6
LINC02396-201ENST00000546911 RXRAP19793 462 aa11.31□□□□□ -0.6
LINC02396-201ENST00000546911 PSMC6P62333 389 aa11.31□□□□□ -0.6
LINC02396-201ENST00000546911 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
LINC02396-201ENST00000546911 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
LINC02396-201ENST00000546911 MFSD5Q6N075 450 aa11.31□□□□□ -0.6
LINC02396-201ENST00000546911 CMTR1Q8N1G2 835 aaKnown RBP11.31□□□□□ -0.6
LINC02396-201ENST00000546911 MTG1Q9BT17 334 aaPredicted RBP11.31□□□□□ -0.6
LINC02396-201ENST00000546911 DDX41Q9UJV9 622 aaKnown RBP11.31□□□□□ -0.6
LINC02396-201ENST00000546911 RGS20O76081 388 aa11.3□□□□□ -0.6
LINC02396-201ENST00000546911 GH1P01241 217 aa11.3□□□□□ -0.6
LINC02396-201ENST00000546911 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
LINC02396-201ENST00000546911 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
LINC02396-201ENST00000546911 EPHB4P54760 987 aa11.3□□□□□ -0.6
LINC02396-201ENST00000546911 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
LINC02396-201ENST00000546911 PGM5Q15124 567 aa11.3□□□□□ -0.6
LINC02396-201ENST00000546911 C9orf50Q5SZB4 431 aa11.3□□□□□ -0.6
LINC02396-201ENST00000546911 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms