RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
DDX54-204ENST00000546898 STARD7Q9NQZ5 370 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 ATP11BQ9Y2G3 1177 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 NKRFO15226 690 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDX54-204ENST00000546898 CTAGE5O15320 804 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 ASGR1P07306 291 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 PSMA5P28066 241 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 GNASQ5JWF2 1037 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 ARHGEF16Q5VV41 709 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 BLOC1S2Q6QNY1 142 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 SRBD1Q8N5C6 995 aaKnown RBP18.38■□□□□ 0.53
DDX54-204ENST00000546898 WDR11Q9BZH6 1224 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 PRO3102Q9H379 93 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 PXMP2Q9NR77 195 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 ELP1O95163 1332 aa18.38■□□□□ 0.53
DDX54-204ENST00000546898 GCOM1H8Y6P7 765 aaPredicted RBP18.37■□□□□ 0.53
DDX54-204ENST00000546898 ZBTB43O43298 467 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 ZEB2O60315 1214 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 POLR2MP0CAP2 368 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 SYN1P17600 705 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 FGD1P98174 961 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 TTLL4Q14679 1199 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 PPP2R5BQ15173 497 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 STXBP2Q15833 593 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 FSCN1Q16658 493 aaKnown RBP18.37■□□□□ 0.53
DDX54-204ENST00000546898 TRIM60Q495X7 471 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 FBXL16Q8N461 479 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 PRKAG2Q9UGJ0 569 aa18.37■□□□□ 0.53
DDX54-204ENST00000546898 KLF18A0A0U1RQI7 1052 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 A0A1W2PPC1 479 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 DYNC1LI2O43237 492 aaPredicted RBP18.36■□□□□ 0.53
DDX54-204ENST00000546898 CABYRO75952 493 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 EIF2AK2P19525 551 aaKnown RBP18.36■□□□□ 0.53
DDX54-204ENST00000546898 IRX5P78411 483 aaPredicted RBP18.36■□□□□ 0.53
DDX54-204ENST00000546898 RTN1Q16799 776 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 MROH7Q68CQ1 1323 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 PIBF1Q8WXW3 757 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 GDF15Q99988 308 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 BRPF3Q9ULD4 1205 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 DNAH12Q6ZR08 3092 aa18.36■□□□□ 0.53
DDX54-204ENST00000546898 MYH7BA7E2Y1 1941 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 NID2Q14112 1375 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
DDX54-204ENST00000546898 NR3C2P08235 984 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 HOXA13P31271 388 aaPredicted RBP18.35■□□□□ 0.53
DDX54-204ENST00000546898 BMP8BP34820 402 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 CPT1AP50416 773 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 BEX3Q00994 111 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 CMTR1Q8N1G2 835 aaKnown RBP18.35■□□□□ 0.53
DDX54-204ENST00000546898 TOX2Q96NM4 488 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 PDCD2LQ9BRP1 358 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
DDX54-204ENST00000546898 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
DDX54-204ENST00000546898 FRMPD4Q14CM0 1322 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 SCN10AQ9Y5Y9 1956 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 GOLGA8AA7E2F4 631 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 GOLGA8BA8MQT2 603 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 EIF3JO75822 258 aaKnown RBP18.34■□□□□ 0.53
DDX54-204ENST00000546898 TXNP10599 105 aaKnown RBP18.34■□□□□ 0.53
DDX54-204ENST00000546898 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
DDX54-204ENST00000546898 MAGEA10P43363 369 aaPredicted RBP18.34■□□□□ 0.53
DDX54-204ENST00000546898 TLE2Q04725 743 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
DDX54-204ENST00000546898 TMEM63BQ5T3F8 832 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 Q6ZUG5 572 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 ANKRD33Q7Z3H0 272 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 OR6J1Q8NGC5 347 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 SEZ6LQ9BYH1 1024 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 AGXT2Q9BYV1 514 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 PDLIM7Q9NR12 457 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
DDX54-204ENST00000546898 PIK3CDO00329 1044 aa18.33■□□□□ 0.52
DDX54-204ENST00000546898 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
DDX54-204ENST00000546898 CPA1P15085 419 aa18.33■□□□□ 0.52
DDX54-204ENST00000546898 PGM5Q15124 567 aa18.33■□□□□ 0.52
DDX54-204ENST00000546898 BRF1Q92994 677 aa18.33■□□□□ 0.52
DDX54-204ENST00000546898 CUL5Q93034 780 aa18.33■□□□□ 0.52
DDX54-204ENST00000546898 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 DCDC2CA8MYV0 355 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 hCG_1984214I3L0E3 225 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 PQBP1O60828 265 aaKnown RBP18.32■□□□□ 0.52
DDX54-204ENST00000546898 ARIH2O95376 493 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 CLTBP09497 229 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 PTGS1P23219 599 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 CCND2P30279 289 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 METAP2P50579 478 aaKnown RBP eCLIP18.32■□□□□ 0.523e-7■□□□□ 9.2
DDX54-204ENST00000546898 CCDC62Q6P9F0 684 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 CXCL17Q6UXB2 119 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 SEPT14Q6ZU15 432 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 VSIG10LQ86VR7 867 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 FCHSD1Q86WN1 690 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 TEX2Q8IWB9 1127 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 CCDC82Q8N4S0 544 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 ZNF713Q8N859 430 aaPredicted RBP18.32■□□□□ 0.52
DDX54-204ENST00000546898 SMARCC2Q8TAQ2 1214 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 VTI1AQ96AJ9 217 aa18.32■□□□□ 0.52
DDX54-204ENST00000546898 TM6SF1Q9BZW5 370 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms