RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 CCDC62Q6P9F0 684 aa21.83■■□□□ 1.09
CHERP-204ENST00000546538 PSRC1Q6PGN9 363 aaPredicted RBP21.83■■□□□ 1.09
CHERP-204ENST00000546538 TIFAQ96CG3 184 aa21.83■■□□□ 1.09
CHERP-204ENST00000546538 TAAR1Q96RJ0 339 aa21.83■■□□□ 1.09
CHERP-204ENST00000546538 ZNF576Q9H609 170 aa21.83■■□□□ 1.09
CHERP-204ENST00000546538 SUPT16HQ9Y5B9 1047 aaKnown RBP21.83■■□□□ 1.09
CHERP-204ENST00000546538 MYH6P13533 1939 aa21.83■■□□□ 1.08
CHERP-204ENST00000546538 A6NJR5 290 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 MYL3P08590 195 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 CYP2C9P11712 490 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 FOSL2P15408 326 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 NT5C2P49902 561 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 PPP2R5BQ15173 497 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 ASPRV1Q53RT3 343 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 TTC22Q5TAA0 569 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 USP38Q8NB14 1042 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 SCFD2Q8WU76 684 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 SCLYQ96I15 445 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 TTC28Q96AY4 2481 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 SCN5AQ14524 2016 aa21.82■■□□□ 1.08
CHERP-204ENST00000546538 RBAK-RBAKDNI3L0D1 243 aa21.81■■□□□ 1.08
CHERP-204ENST00000546538 PPP1R11O60927 126 aaPredicted RBP21.81■■□□□ 1.08
CHERP-204ENST00000546538 CPT1AP50416 773 aa21.81■■□□□ 1.08
CHERP-204ENST00000546538 CCDC178Q5BJE1 867 aa21.81■■□□□ 1.08
CHERP-204ENST00000546538 SEZ6LQ9BYH1 1024 aa21.81■■□□□ 1.08
CHERP-204ENST00000546538 POLR3EQ9NVU0 708 aa21.81■■□□□ 1.08
CHERP-204ENST00000546538 MYO9BQ13459 2157 aa21.81■■□□□ 1.08
CHERP-204ENST00000546538 ABCB11O95342 1321 aa21.81■■□□□ 1.08
CHERP-204ENST00000546538 PTH1RQ03431 593 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 NBPF20Q3BBV1 942 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 OTOP2Q7RTS6 562 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 MTG1Q9BT17 334 aaPredicted RBP21.8■■□□□ 1.08
CHERP-204ENST00000546538 SENP2Q9HC62 589 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 VAT1LQ9HCJ6 419 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 CTNNA3Q9UI47 895 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 YBX2Q9Y2T7 364 aaKnown RBP21.8■■□□□ 1.08
CHERP-204ENST00000546538 XIRP2A4UGR9 3374 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 KIAA1217Q5T5P2 1943 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 PARP1P09874 1014 aaKnown RBP21.8■■□□□ 1.08
CHERP-204ENST00000546538 TXNP10599 105 aaKnown RBP21.8■■□□□ 1.08
CHERP-204ENST00000546538 MTMR8Q96EF0 704 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 KRT23Q9C075 422 aa21.8■■□□□ 1.08
CHERP-204ENST00000546538 TRANK1O15050 2925 aa21.79■■□□□ 1.08
CHERP-204ENST00000546538 NKRFO15226 690 aaKnown RBP eCLIP21.79■■□□□ 1.08
CHERP-204ENST00000546538 FGBP02675 491 aa21.79■■□□□ 1.08
CHERP-204ENST00000546538 ARHGAP1Q07960 439 aa21.79■■□□□ 1.08
CHERP-204ENST00000546538 CTAGE1Q96RT6 745 aa21.79■■□□□ 1.08
CHERP-204ENST00000546538 MAD2L2Q9UI95 211 aa21.79■■□□□ 1.08
CHERP-204ENST00000546538 CYP21A2P08686 494 aa21.78■■□□□ 1.08
CHERP-204ENST00000546538 LY6KQ17RY6 165 aa21.78■■□□□ 1.08
CHERP-204ENST00000546538 FBXO11Q86XK2 927 aa21.78■■□□□ 1.08
CHERP-204ENST00000546538 UBAC1Q9BSL1 405 aa21.78■■□□□ 1.08
CHERP-204ENST00000546538 CNNM2Q9H8M5 875 aa21.78■■□□□ 1.08
CHERP-204ENST00000546538 TANC1Q9C0D5 1861 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 CHMLP26374 656 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 IRX6P78412 446 aaPredicted RBP21.77■■□□□ 1.08
CHERP-204ENST00000546538 GHRHRQ02643 423 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 TTLL4Q14679 1199 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 IFIT1BQ5T764 474 aaKnown RBP21.77■■□□□ 1.08
CHERP-204ENST00000546538 SEPT14Q6ZU15 432 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 STOX1Q6ZVD7 989 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 TET1Q8NFU7 2136 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 AFG1LQ8WV93 481 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 RMDN3Q96TC7 470 aa21.77■■□□□ 1.08
CHERP-204ENST00000546538 BAZ2BQ9UIF8 2168 aaKnown RBP21.77■■□□□ 1.08
CHERP-204ENST00000546538 PALM3A6NDB9 673 aaPredicted RBP21.76■■□□□ 1.07
CHERP-204ENST00000546538 RABGGTBP53611 331 aa21.76■■□□□ 1.07
CHERP-204ENST00000546538 ADGRE1Q14246 886 aa21.76■■□□□ 1.07
CHERP-204ENST00000546538 NSUN6Q8TEA1 469 aaKnown RBP21.76■■□□□ 1.07
CHERP-204ENST00000546538 KAT2BQ92831 832 aa21.76■■□□□ 1.07
CHERP-204ENST00000546538 MAF1Q9H063 256 aa21.76■■□□□ 1.07
CHERP-204ENST00000546538 NKX2-4Q9H2Z4 354 aa21.76■■□□□ 1.07
CHERP-204ENST00000546538 RAD50Q92878 1312 aa21.76■■□□□ 1.07
CHERP-204ENST00000546538 KLRF2D3W0D1 207 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 RGS20O76081 388 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 MMP3P08254 477 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 MYOGP15173 224 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 EIF2AK2P19525 551 aaKnown RBP21.75■■□□□ 1.07
CHERP-204ENST00000546538 HSD17B4P51659 736 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 FAM47CQ5HY64 1035 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 NFRKBQ6P4R8 1299 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 MPHOSPH6Q99547 160 aaKnown RBP21.75■■□□□ 1.07
CHERP-204ENST00000546538 PRDM12Q9H4Q4 367 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 PXMP2Q9NR77 195 aa21.75■■□□□ 1.07
CHERP-204ENST00000546538 MRPL11Q9Y3B7 192 aaKnown RBP21.75■■□□□ 1.07
CHERP-204ENST00000546538 DHX16O60231 1041 aaKnown RBP21.74■■□□□ 1.07
CHERP-204ENST00000546538 MCF2L2Q86YR7 1114 aa21.74■■□□□ 1.07
CHERP-204ENST00000546538 IWS1Q96ST2 819 aa21.74■■□□□ 1.07
CHERP-204ENST00000546538 PRDM6Q9NQX0 595 aa21.74■■□□□ 1.07
CHERP-204ENST00000546538 GPHNQ9NQX3 736 aaPredicted RBP21.74■■□□□ 1.07
CHERP-204ENST00000546538 DDX41Q9UJV9 622 aaKnown RBP21.74■■□□□ 1.07
CHERP-204ENST00000546538 CYTH3O43739 400 aa21.73■■□□□ 1.07
CHERP-204ENST00000546538 CFBP00751 764 aa21.73■■□□□ 1.07
CHERP-204ENST00000546538 SUPT20HL2P0C7V6 817 aa21.73■■□□□ 1.07
CHERP-204ENST00000546538 COL9A3Q14050 684 aaPredicted RBP21.73■■□□□ 1.07
CHERP-204ENST00000546538 DEFB128Q7Z7B8 93 aa21.73■■□□□ 1.07
CHERP-204ENST00000546538 IL31RAQ8NI17 732 aa21.73■■□□□ 1.07
CHERP-204ENST00000546538 AMNQ9BXJ7 453 aa21.73■■□□□ 1.07
CHERP-204ENST00000546538 KPNA6O60684 536 aa21.72■■□□□ 1.07
CHERP-204ENST00000546538 GH1P01241 217 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms