RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PCDHA11Q9Y5I1 949 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 EPOPA6NHQ4 379 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 MYL3P08590 195 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 GOLGA8HP0CJ92 632 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 SDSP20132 328 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 GHRHRQ02643 423 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 ARHGAP1Q07960 439 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 GPATCH4Q5T3I0 446 aaKnown RBP14.75□□□□□ -0.05
COPS7A-221ENST00000546229 DGKHQ86XP1 1220 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 ATXN2LQ8WWM7 1075 aaKnown RBP14.75□□□□□ -0.05
COPS7A-221ENST00000546229 KAT2BQ92831 832 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 ZKSCAN3Q9BRR0 538 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 MAF1Q9H063 256 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 MTIF3Q9H2K0 278 aaKnown RBP14.75□□□□□ -0.05
COPS7A-221ENST00000546229 TOMM22Q9NS69 142 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 THEGQ9P2T0 379 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 PNMA2Q9UL42 364 aa14.75□□□□□ -0.05
COPS7A-221ENST00000546229 PRRC2BQ5JSZ5 2229 aaKnown RBP14.75□□□□□ -0.05
COPS7A-221ENST00000546229 SUPT20HL2P0C7V6 817 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 ATP2A2P16615 1042 aaKnown RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 POU3F3P20264 500 aaPredicted RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 PTPN11Q06124 597 aaPredicted RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 PDE4DQ08499 809 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 RBL2Q08999 1139 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 CDC37Q16543 378 aaPredicted RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 MFSD6Q6ZSS7 791 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 SESTD1Q86VW0 696 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 ENAHQ8N8S7 591 aaPredicted RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 SYTL5Q8TDW5 730 aaPredicted RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 DHX38Q92620 1227 aaKnown RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 ASB2Q96Q27 587 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 SLC4A7Q9Y6M7 1214 aa14.74□□□□□ -0.05
COPS7A-221ENST00000546229 TRIP12Q14669 1992 aaPredicted RBP14.74□□□□□ -0.05
COPS7A-221ENST00000546229 MMP3P08254 477 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 IQCF3P0C7M6 154 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 RFC2P35250 354 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 NT5C2P49902 561 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 SLC35G1Q2M3R5 365 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 TCTN1Q2MV58 587 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 USH1GQ495M9 461 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 PPP2R2DQ66LE6 453 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 SPRED2Q7Z698 418 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 RPUSD2Q8IZ73 545 aaKnown RBP14.73□□□□□ -0.05
COPS7A-221ENST00000546229 PNMA1Q8ND90 353 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 ESR2Q92731 530 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 RNF41Q9H4P4 317 aaPredicted RBP14.73□□□□□ -0.05
COPS7A-221ENST00000546229 SLC28A3Q9HAS3 691 aa14.73□□□□□ -0.05
COPS7A-221ENST00000546229 ABCB11O95342 1321 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 TNFRSF10AO00220 468 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 PPP1R11O60927 126 aaPredicted RBP14.72□□□□□ -0.05
COPS7A-221ENST00000546229 KDM4AO75164 1064 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 IGHDP01880 384 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 CA3P07451 260 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 TXNP10599 105 aaKnown RBP14.72□□□□□ -0.05
COPS7A-221ENST00000546229 HOXD8P13378 290 aaPredicted RBP14.72□□□□□ -0.05
COPS7A-221ENST00000546229 NUCB1Q02818 461 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 QRICH1Q2TAL8 776 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 TRAF7Q6Q0C0 670 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 DEFB128Q7Z7B8 93 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 ADGRF4Q8IZF3 695 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 EMID1Q96A84 441 aaPredicted RBP14.72□□□□□ -0.05
COPS7A-221ENST00000546229 MTMR8Q96EF0 704 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 TAAR1Q96RJ0 339 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 JMJD4Q9H9V9 463 aa14.72□□□□□ -0.05
COPS7A-221ENST00000546229 RAD50Q92878 1312 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 B4E1Z4 1266 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 KPNA6O60684 536 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 RGS20O76081 388 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 TAP1Q03518 808 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
COPS7A-221ENST00000546229 CCDC85BQ15834 202 aaPredicted RBP14.71□□□□□ -0.05
COPS7A-221ENST00000546229 LY6KQ17RY6 165 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 ASPRV1Q53RT3 343 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 GDF6Q6KF10 455 aaPredicted RBP14.71□□□□□ -0.05
COPS7A-221ENST00000546229 CHD1LQ86WJ1 897 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 ADAMTS19Q8TE59 1207 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 AFG1LQ8WV93 481 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 PPM1EQ8WY54 764 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 ZSCAN10Q96SZ4 725 aaPredicted RBP14.71□□□□□ -0.05
COPS7A-221ENST00000546229 SLC9A7Q96T83 725 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 DSCC1Q9BVC3 393 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 MTCH2Q9Y6C9 303 aa14.71□□□□□ -0.05
COPS7A-221ENST00000546229 ZBBXA8MT70 800 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 HAS3O00219 553 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 RFXAPO00287 272 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 LPXNO60711 386 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 HSD17B4P51659 736 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 HIC1Q14526 733 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 SEC23AQ15436 765 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 TRIM71Q2Q1W2 868 aaKnown RBP14.7□□□□□ -0.06
COPS7A-221ENST00000546229 FAM47CQ5HY64 1035 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 HERC6Q8IVU3 1022 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 PHOSPHO2Q8TCD6 241 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 WNT8BQ93098 351 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 ZSWIM5Q9P217 1185 aa14.7□□□□□ -0.06
COPS7A-221ENST00000546229 SIP14410 1827 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms