RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FAM153CQ494X1 144 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 RNF187Q5TA31 235 aaPredicted RBP15.73■□□□□ 0.11
SRP54-202ENST00000546080 RRAGAQ7L523 313 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 CABP7Q86V35 215 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 CD302Q8IX05 232 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 ANKRD13CQ8N6S4 541 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 PIGBQ92521 554 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 POLD4Q9HCU8 107 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 FAM153AQ9UHL3 310 aa15.73■□□□□ 0.11
SRP54-202ENST00000546080 LRRC53A6NM62 1247 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 NKRFO15226 690 aaKnown RBP eCLIP15.72■□□□□ 0.11
SRP54-202ENST00000546080 BUB1O43683 1085 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
SRP54-202ENST00000546080 FAM47AQ5JRC9 791 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 KLHDC7AQ5VTJ3 777 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 GPIHBP1Q8IV16 184 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 MREGQ8N565 214 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 NDST4Q9H3R1 872 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 SALL4Q9UJQ4 1053 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 RREB1Q92766 1687 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
SRP54-202ENST00000546080 ESYT3A0FGR9 886 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 USP17L21D6R901 530 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 LAD1O00515 517 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 GUCY2FP51841 1108 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 RASSF7Q02833 373 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 INF2Q27J81 1249 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 CNNM4Q6P4Q7 775 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 NLRP14Q86W24 1093 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
SRP54-202ENST00000546080 MTMR8Q96EF0 704 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 A1CFQ9NQ94 594 aaKnown RBP15.72■□□□□ 0.11
SRP54-202ENST00000546080 TCP11L1Q9NUJ3 509 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 ZBTB1Q9Y2K1 713 aa15.72■□□□□ 0.11
SRP54-202ENST00000546080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
SRP54-202ENST00000546080 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.72■□□□□ 0.11
SRP54-202ENST00000546080 NHSL1Q5SYE7 1610 aa15.71■□□□□ 0.11
SRP54-202ENST00000546080 ZSCAN5CA6NGD5 496 aaPredicted RBP15.71■□□□□ 0.11
SRP54-202ENST00000546080 HMGB1P1B2RPK0 211 aaPredicted RBP15.71■□□□□ 0.11
SRP54-202ENST00000546080 MDH1P40925 334 aaKnown RBP15.71■□□□□ 0.11
SRP54-202ENST00000546080 GFPT1Q06210 699 aaPredicted RBP15.71■□□□□ 0.11
SRP54-202ENST00000546080 EMC10Q5UCC4 262 aa15.71■□□□□ 0.11
SRP54-202ENST00000546080 CCDC84Q86UT8 332 aaPredicted RBP15.71■□□□□ 0.11
SRP54-202ENST00000546080 RNF10Q8N5U6 811 aaKnown RBP15.71■□□□□ 0.11
SRP54-202ENST00000546080 MYCBPAPQ8TBZ2 947 aa15.71■□□□□ 0.11
SRP54-202ENST00000546080 ATP6V1G3Q96LB4 118 aa15.71■□□□□ 0.11
SRP54-202ENST00000546080 C7orf25Q9BPX7 421 aa15.71■□□□□ 0.11
SRP54-202ENST00000546080 JPH2Q9BR39 696 aaPredicted RBP15.71■□□□□ 0.11
SRP54-202ENST00000546080 NUP98P52948 1817 aa15.71■□□□□ 0.1
SRP54-202ENST00000546080 ERVV-1B6SEH8 477 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 ORC4O43929 436 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 CYP19A1P11511 503 aaPredicted RBP15.7■□□□□ 0.1
SRP54-202ENST00000546080 RDXP35241 583 aaKnown RBP15.7■□□□□ 0.1
SRP54-202ENST00000546080 PRPHP41219 470 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 HDLBPQ00341 1268 aaKnown RBP15.7■□□□□ 0.1
SRP54-202ENST00000546080 MAN2A1Q16706 1144 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 ZNF34Q8IZ26 560 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 WHAMMQ8TF30 809 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 PIK3R5Q8WYR1 880 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 CCT8L2Q96SF2 557 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 CARD10Q9BWT7 1032 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 SEMA6BQ9H3T3 888 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 VCPKMTQ9H867 229 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 PCDHA6Q9UN73 950 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 PCDHA8Q9Y5H6 950 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 FLT1P17948 1338 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 COL5A2P05997 1499 aaPredicted RBP15.7■□□□□ 0.1
SRP54-202ENST00000546080 CCDC172P0C7W6 258 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 SEC24CP53992 1094 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 AMPD3Q01432 767 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 CHRNDQ07001 517 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 CACNA2D4Q7Z3S7 1137 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 MAATS1Q7Z4T9 603 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 AK8Q96MA6 479 aa15.7■□□□□ 0.1
SRP54-202ENST00000546080 GOLGA6L10A6NI86 522 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 TSPY2A6NKD2 308 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 E7EVH7 732 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 M0R2N6 131 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 FAM107AO95990 144 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 SLC1A4P43007 532 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 DNA2P51530 1060 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 ACTN3Q08043 901 aaPredicted RBP15.69■□□□□ 0.1
SRP54-202ENST00000546080 PLCB4Q15147 1175 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 CCDC152Q4G0S7 254 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 COBLL1Q53SF7 1204 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 TDRD12Q587J7 1177 aaKnown RBP15.69■□□□□ 0.1
SRP54-202ENST00000546080 RPAINQ86UA6 219 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 KIAA0895Q8NCT3 520 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 C1orf131Q8NDD1 294 aaKnown RBP15.69■□□□□ 0.1
SRP54-202ENST00000546080 CASKIN2Q8WXE0 1202 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 KRT12Q99456 494 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 GGA2Q9UJY4 613 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 SSU72P8A0A1W2PR75 194 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 GRID2IPA4D2P6 1211 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 CHUKO15111 745 aa15.69■□□□□ 0.1
SRP54-202ENST00000546080 FGFR1OPO95684 399 aaKnown RBP15.69■□□□□ 0.1
SRP54-202ENST00000546080 EVX2Q03828 476 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms