RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
SNHG1-224ENST00000545688 FXNQ16595 210 aa7.73□□□□□ -1.17
SNHG1-224ENST00000545688 NPLOC4Q8TAT6 608 aa7.73□□□□□ -1.17
SNHG1-224ENST00000545688 DPF3Q92784 378 aa7.73□□□□□ -1.17
SNHG1-224ENST00000545688 PEX11GQ96HA9 241 aa7.73□□□□□ -1.17
SNHG1-224ENST00000545688 RNF38Q9H0F5 515 aa7.73□□□□□ -1.17
SNHG1-224ENST00000545688 NUDT5Q9UKK9 219 aa7.73□□□□□ -1.17
SNHG1-224ENST00000545688 A0A0G2JLL6 359 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-224ENST00000545688 PLA2G1BP04054 148 aaKnown RBP7.72□□□□□ -1.17
SNHG1-224ENST00000545688 NTRK1P04629 796 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 NCAM1P13591 858 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 PMLP29590 882 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 DNAJA1P31689 397 aaKnown RBP7.72□□□□□ -1.17
SNHG1-224ENST00000545688 CTSWP56202 376 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 FOXO4P98177 505 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 LINC01356Q8N9X3 169 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 TP53I13Q8NBR0 393 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-224ENST00000545688 PLEKHO2Q8TD55 490 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 MARCH2Q9P0N8 246 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 LRP2BPQ9P2M1 347 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 FAN1Q9Y2M0 1017 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 SIT1Q9Y3P8 196 aa7.72□□□□□ -1.17
SNHG1-224ENST00000545688 FFAR3O14843 346 aa7.71□□□□□ -1.18
SNHG1-224ENST00000545688 GJB6O95452 261 aa7.71□□□□□ -1.18
SNHG1-224ENST00000545688 NLGN1Q8N2Q7 840 aa7.71□□□□□ -1.18
SNHG1-224ENST00000545688 BTG4Q9NY30 223 aa7.71□□□□□ -1.18
SNHG1-224ENST00000545688 SASH1O94885 1247 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 SNRPB2P08579 225 aaKnown RBP7.7□□□□□ -1.18
SNHG1-224ENST00000545688 ECI1P42126 302 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 SLC9A5Q14940 896 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 SF1Q15637 639 aaKnown RBP7.7□□□□□ -1.18
SNHG1-224ENST00000545688 CCDC103Q8IW40 242 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 TEX2Q8IWB9 1127 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 SYT8Q8NBV8 401 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 FEZF2Q8TBJ5 459 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 FNIP1Q8TF40 1166 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 HNRNPLLQ8WVV9 542 aaKnown RBP7.7□□□□□ -1.18
SNHG1-224ENST00000545688 XYLT2Q9H1B5 865 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 TMEFF2Q9UIK5 374 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-224ENST00000545688 PMF1-BGLAPU3KQ54 211 aa7.7□□□□□ -1.18
SNHG1-224ENST00000545688 OTOL1A6NHN0 477 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-224ENST00000545688 ARNTLO00327 626 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 HOXC12P31275 282 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 CAP1Q01518 475 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 PRSS53Q2L4Q9 553 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 VWA3BQ502W6 1294 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 B3GNT8Q7Z7M8 397 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 SP8Q8IXZ3 490 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 KREMEN2Q8NCW0 462 aa7.69□□□□□ -1.18
SNHG1-224ENST00000545688 ZBTB7AO95365 584 aa7.68□□□□□ -1.18
SNHG1-224ENST00000545688 SCG5P05408 212 aa7.68□□□□□ -1.18
SNHG1-224ENST00000545688 FPR2P25090 351 aa7.68□□□□□ -1.18
SNHG1-224ENST00000545688 HTRA3P83110 453 aa7.68□□□□□ -1.18
SNHG1-224ENST00000545688 RBM10P98175 930 aaKnown RBP7.68□□□□□ -1.18
SNHG1-224ENST00000545688 SLC10A6Q3KNW5 377 aa7.68□□□□□ -1.18
SNHG1-224ENST00000545688 E4F1Q66K89 784 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-224ENST00000545688 DCP2Q8IU60 420 aaKnown RBP7.68□□□□□ -1.18
SNHG1-224ENST00000545688 ADGRG2Q8IZP9 1017 aa7.68□□□□□ -1.18
SNHG1-224ENST00000545688 DIO2Q92813 273 aa7.68□□□□□ -1.18
SNHG1-224ENST00000545688 C22orf46C9J442 243 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 MEFVO15553 781 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-224ENST00000545688 KCNJ6P48051 423 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 GFRA1P56159 465 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 RPL11P62913 178 aaKnown RBP7.67□□□□□ -1.18
SNHG1-224ENST00000545688 IQCEQ6IPM2 695 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 EEPD1Q7L9B9 569 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 CELF2-AS1Q8N7Q2 184 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 SMARCC2Q8TAQ2 1214 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 CPA5Q8WXQ8 436 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 LUC7LQ9NQ29 371 aaKnown RBP7.67□□□□□ -1.18
SNHG1-224ENST00000545688 ST7Q9NRC1 585 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 IGSF5Q9NSI5 407 aa7.67□□□□□ -1.18
SNHG1-224ENST00000545688 TIMM13Q9Y5L4 95 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-224ENST00000545688 A0A1B0GTL3 188 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 B8ZZF3 427 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 CACNB2Q08289 660 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-224ENST00000545688 KCNAB2Q13303 367 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 ANKS3Q6ZW76 656 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 SAPCD2Q86UD0 394 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 NLRP10Q86W26 655 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 PPIL6Q8IXY8 311 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 ZDHHC14Q8IZN3 488 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 TMEM145Q8NBT3 493 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 ZNF526Q8TF50 670 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-224ENST00000545688 NOX5Q96PH1 765 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 GMLQ99445 158 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 RTEL1Q9NZ71 1219 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 FBXL7Q9UJT9 491 aa7.66□□□□□ -1.18
SNHG1-224ENST00000545688 R3HCC1Q9Y3T6 440 aaKnown RBP7.66□□□□□ -1.18
SNHG1-224ENST00000545688 NCANO14594 1321 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 SGSM2O43147 1006 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 CPP00450 1065 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 CAPNS1P04632 268 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 BCL6P41182 706 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 SLURP1P55000 103 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 DLX2Q07687 328 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-224ENST00000545688 NFIXQ14938 502 aa7.65□□□□□ -1.18
SNHG1-224ENST00000545688 ACBD5Q5T8D3 534 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms