RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SUGP1Q8IWZ8 645 aaKnown RBP9.72□□□□□ -0.85
TDP1-204ENST00000545686 RUFY1Q96T51 708 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 LRRC1Q9BTT6 524 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 ZMYND12Q9H0C1 365 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 BTG4Q9NY30 223 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 STK17AQ9UEE5 414 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 MINPP1Q9UNW1 487 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 PVALEFA0A1B0GWK0 134 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 ZEB2O60315 1214 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 CYP2D6P10635 497 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 TXNRD1Q16881 649 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 CLEC4GQ6UXB4 293 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 POTEDQ86YR6 584 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 C2CD5Q86YS7 1000 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 KIAA0895Q8NCT3 520 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 ZBTB9Q96C00 473 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 CALML4Q96GE6 196 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 GDAP1L1Q96MZ0 367 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 SPZ1Q9BXG8 430 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 NUCKS1Q9H1E3 243 aaKnown RBP9.71□□□□□ -0.85
TDP1-204ENST00000545686 NDST4Q9H3R1 872 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 YY1AP1Q9H869 796 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 IL17RBQ9NRM6 502 aa9.71□□□□□ -0.85
TDP1-204ENST00000545686 DMGDHQ9UI17 866 aaKnown RBP9.71□□□□□ -0.85
TDP1-204ENST00000545686 FOCADQ5VW36 1801 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 PALM3A6NDB9 673 aaPredicted RBP9.71□□□□□ -0.86
TDP1-204ENST00000545686 RBAK-RBAKDNI3L0D1 243 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 RGL2O15211 777 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 AKR1B10O60218 316 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 MOCS3O95396 460 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 EIF4A3P38919 411 aaKnown RBP9.71□□□□□ -0.86
TDP1-204ENST00000545686 TFAP4Q01664 338 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 EVX2Q03828 476 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.86
TDP1-204ENST00000545686 C12orf60Q5U649 245 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 C8orf74Q6P047 294 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 KRT26Q7Z3Y9 468 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 HEATR3Q7Z4Q2 680 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 GUF1Q8N442 669 aaKnown RBP9.71□□□□□ -0.86
TDP1-204ENST00000545686 MREGQ8N565 214 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 C1orf131Q8NDD1 294 aaKnown RBP9.71□□□□□ -0.86
TDP1-204ENST00000545686 SEMA6BQ9H3T3 888 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 MLXIPQ9HAP2 919 aa9.71□□□□□ -0.86
TDP1-204ENST00000545686 LUC7LQ9NQ29 371 aaKnown RBP9.71□□□□□ -0.86
TDP1-204ENST00000545686 PLEKP08567 350 aaPredicted RBP9.7□□□□□ -0.86
TDP1-204ENST00000545686 FCER1AP12319 257 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 GNA11P29992 359 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 CCT5P48643 541 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 ASTE1Q2TB18 679 aaPredicted RBP9.7□□□□□ -0.86
TDP1-204ENST00000545686 EMC10Q5UCC4 262 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 SPTY2D1Q68D10 685 aaPredicted RBP9.7□□□□□ -0.86
TDP1-204ENST00000545686 NFRKBQ6P4R8 1299 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 UNC13DQ70J99 1090 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 NEK8Q86SG6 692 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 IFT20Q8IY31 132 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 HDAC7Q8WUI4 952 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 BAP1Q92560 729 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 SYN2Q92777 582 aaPredicted RBP9.7□□□□□ -0.86
TDP1-204ENST00000545686 RRP36Q96EU6 259 aaKnown RBP9.7□□□□□ -0.86
TDP1-204ENST00000545686 NOX5Q96PH1 765 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 PLIN2Q99541 437 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 PLEKHA4Q9H4M7 779 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 MCM9Q9NXL9 1143 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 GRID2IPA4D2P6 1211 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 CYTH3O43739 400 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 SMARCA1P28370 1054 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 ATP6V1AP38606 617 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 MAGEA1P43355 309 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 GNGT1P63211 74 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 EZH2Q15910 746 aaKnown RBP9.7□□□□□ -0.86
TDP1-204ENST00000545686 SLC35G1Q2M3R5 365 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 CFAP221Q4G0U5 840 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 PDXDC1Q6P996 788 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 SV2BQ7L1I2 683 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 PROM2Q8N271 834 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 BCAS4Q8TDM0 211 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 SMCR8Q8TEV9 937 aaPredicted RBP9.7□□□□□ -0.86
TDP1-204ENST00000545686 LRRC27Q9C0I9 530 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 GDF3Q9NR23 364 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 FAM169AQ9Y6X4 670 aa9.7□□□□□ -0.86
TDP1-204ENST00000545686 ARFGEF1Q9Y6D6 1849 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 NRAPQ86VF7 1730 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 LRRC53A6NM62 1247 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 SRRM3A6NNA2 597 aaPredicted RBP9.69□□□□□ -0.86
TDP1-204ENST00000545686 ERLIN2O94905 339 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 HIBADHP31937 336 aaKnown RBP9.69□□□□□ -0.86
TDP1-204ENST00000545686 PAK2Q13177 524 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 PSMD2Q13200 908 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 B4GALNT4Q76KP1 1039 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 CD302Q8IX05 232 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.69□□□□□ -0.868e-7■■■■■ 32.1
TDP1-204ENST00000545686 PAGR1Q9BTK6 254 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 MMTAG2Q9BU76 263 aaKnown RBP9.69□□□□□ -0.86
TDP1-204ENST00000545686 CDCA7Q9BWT1 371 aaPredicted RBP9.69□□□□□ -0.86
TDP1-204ENST00000545686 TLR10Q9BXR5 811 aa9.69□□□□□ -0.86
TDP1-204ENST00000545686 ANKRD2Q9GZV1 360 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms