RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 NYAP2Q9P242 653 aa4.34□□□□□ -1.71
LPCAT3-212ENST00000545459 ZHX1Q9UKY1 873 aaPredicted RBP4.34□□□□□ -1.71
LPCAT3-212ENST00000545459 CTDP1Q9Y5B0 961 aaPredicted RBP4.34□□□□□ -1.71
LPCAT3-212ENST00000545459 ELP1O95163 1332 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 MROH7Q68CQ1 1323 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 IGKV6D-41A0A0C4DH26 115 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 A0A0U1RQG5 324 aaPredicted RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 PALM3A6NDB9 673 aaPredicted RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 RNF113AO15541 343 aaKnown RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ADCY6O43306 1168 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 SMARCA5O60264 1052 aaPredicted RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ASGR1P07306 291 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 C6orf222P0C671 652 aaPredicted RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 PDIA4P13667 645 aaKnown RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 CST5P28325 142 aaPredicted RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 CDK7P50613 346 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 GJA9P57773 515 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 PPIGQ13427 754 aaKnown RBP eCLIP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ACVR2BQ13705 512 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 CCDC144BQ3MJ40 725 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 GNASQ5JWF2 1037 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 MFSD5Q6N075 450 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 GIMAP6Q6P9H5 292 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 CCDC174Q6PII3 467 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 C16orf59Q7L2K0 433 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ZNF444Q8N0Y2 327 aaPredicted RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ANKRD35Q8N283 1001 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 KBTBD3Q8NAB2 608 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ZNF511Q8NB15 262 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 PCSK9Q8NBP7 692 aaKnown RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 CHST13Q8NET6 341 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ADAM32Q8TC27 787 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 APPBP2Q92624 585 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 OSBP2Q969R2 916 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 MKL1Q969V6 931 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 KIFC2Q96AC6 838 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 VTI1AQ96AJ9 217 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 PBXIP1Q96AQ6 731 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 CEP95Q96GE4 821 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 FGD4Q96M96 766 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 GLT1D1Q96MS3 346 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.33□□□□□ -1.727e-6■□□□□ 9.4
LPCAT3-212ENST00000545459 UPF3AQ9H1J1 476 aaKnown RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ABHD16BQ9H3Z7 469 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ZNF576Q9H609 170 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 SPC25Q9HBM1 224 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 SLC38A10Q9HBR0 1119 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ZNF287Q9HBT7 754 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 RAVER2Q9HCJ3 691 aaKnown RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 ECHDC1Q9NTX5 307 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 TFIP11Q9UBB9 837 aaKnown RBP4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 CLIP2Q9UDT6 1046 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 FBXO40Q9UH90 709 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 FEM1BQ9UK73 627 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 TBX21Q9UL17 535 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 SYNPO2Q9UMS6 1093 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 PCDHB9Q9Y5E1 797 aa4.33□□□□□ -1.72
LPCAT3-212ENST00000545459 GRXCR1A8MXD5 290 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TMEM232C9JQI7 657 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 RNF223E7ERA6 249 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 M0R2C6 588 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 ARVCFO00192 962 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 CTAGE5O15320 804 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TLR3O15455 904 aaKnown RBP4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 GPAA1O43292 621 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 ATP9BO43861 1147 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 LZTS3O60299 673 aaPredicted RBP4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 PRDM1O75626 825 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 CD2BP2O95400 341 aaKnown RBP4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TTLL1O95922 423 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 APPP05067 770 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 BMP3P12645 472 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 CSF2RAP15509 400 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 GNAT2P19087 354 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 RFX1P22670 979 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TDO2P48775 406 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 RPIAP49247 311 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 OAZ1P54368 228 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 NKX3-2P78367 333 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 CNTN2Q02246 1040 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TNFAIP2Q03169 654 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TMEM240Q5SV17 173 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 RASIP1Q5U651 963 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 SLFN13Q68D06 897 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 PSRC1Q6PGN9 363 aaPredicted RBP4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 CCDC129Q6ZRS4 1044 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 ZNF365Q70YC5 407 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 ARMCX2Q7L311 632 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 FAM126BQ8IXS8 530 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 CCDC144CPQ8IYA2 1237 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 LRRC47Q8N1G4 583 aaKnown RBP4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TMEM199Q8N511 208 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 USP38Q8NB14 1042 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 GMCL1P1Q8NEA9 526 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 TIFAQ96CG3 184 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 PBX4Q9BYU1 374 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 KATNBL1Q9H079 304 aa4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 EPB41L4AQ9HCS5 686 aaPredicted RBP4.32□□□□□ -1.72
LPCAT3-212ENST00000545459 PRDM6Q9NQX0 595 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms