RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
YBX3-216ENST00000544622 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
YBX3-216ENST00000544622 RPS6KB1P23443 525 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 CDK7P50613 346 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 MRPL12P52815 198 aaKnown RBP13.22□□□□□ -0.29
YBX3-216ENST00000544622 RTP1P59025 263 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 PDE4DQ08499 809 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 CCDC62Q6P9F0 684 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 ANKRD33Q7Z3H0 272 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 TLK2Q86UE8 772 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 VSIG10LQ86VR7 867 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 RAB11FIP4Q86YS3 637 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 RRP36Q96EU6 259 aaKnown RBP13.22□□□□□ -0.29
YBX3-216ENST00000544622 MPHOSPH6Q99547 160 aaKnown RBP13.22□□□□□ -0.29
YBX3-216ENST00000544622 PDCD2LQ9BRP1 358 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 SPC25Q9HBM1 224 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
YBX3-216ENST00000544622 RBM28Q9NW13 759 aaKnown RBP13.22□□□□□ -0.29
YBX3-216ENST00000544622 MYH6P13533 1939 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 LAMA2P24043 3122 aaKnown RBP13.21□□□□□ -0.29
YBX3-216ENST00000544622 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
YBX3-216ENST00000544622 PIK3CDO00329 1044 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 MEIS2O14770 477 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 ZBTB43O43298 467 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 EIF3JO75822 258 aaKnown RBP13.21□□□□□ -0.29
YBX3-216ENST00000544622 RGS20O76081 388 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 ARIH2O95376 493 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 NR3C2P08235 984 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 PSMA5P28066 241 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 CDC27P30260 824 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 HOXA13P31271 388 aaPredicted RBP13.21□□□□□ -0.29
YBX3-216ENST00000544622 BMP8BP34820 402 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 PPP2R5BQ15173 497 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 STXBP2Q15833 593 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
YBX3-216ENST00000544622 BLOC1S2Q6QNY1 142 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 Q6ZUG5 572 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 TM6SF1Q9BZW5 370 aa13.21□□□□□ -0.29
YBX3-216ENST00000544622 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
YBX3-216ENST00000544622 NID2Q14112 1375 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 FRMPD4Q14CM0 1322 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 A6NJR5 290 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 NKRFO15226 690 aaKnown RBP eCLIP13.2□□□□□ -0.3
YBX3-216ENST00000544622 SYN1P17600 705 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 EIF2AK2P19525 551 aaKnown RBP13.2□□□□□ -0.3
YBX3-216ENST00000544622 BEX3Q00994 111 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 FSCN1Q16658 493 aaKnown RBP13.2□□□□□ -0.3
YBX3-216ENST00000544622 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 RUFY3Q7L099 469 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 CCDC82Q8N4S0 544 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 PIBF1Q8WXW3 757 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 BRF1Q92994 677 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
YBX3-216ENST00000544622 ZMYND8Q9ULU4 1186 aaPredicted RBP13.2□□□□□ -0.3
YBX3-216ENST00000544622 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 CABYRO75952 493 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
YBX3-216ENST00000544622 CASTP20810 708 aaKnown RBP13.19□□□□□ -0.3
YBX3-216ENST00000544622 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
YBX3-216ENST00000544622 TLE2Q04725 743 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 APOBRQ0VD83 1088 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 TTLL4Q14679 1199 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 PGM5Q15124 567 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 RTN1Q16799 776 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 NOL8Q76FK4 1167 aaKnown RBP13.19□□□□□ -0.3
YBX3-216ENST00000544622 AP5M1Q9H0R1 490 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
YBX3-216ENST00000544622 DDX41Q9UJV9 622 aaKnown RBP13.19□□□□□ -0.3
YBX3-216ENST00000544622 ATP11BQ9Y2G3 1177 aa13.19□□□□□ -0.3
YBX3-216ENST00000544622 A0A1W2PPC1 479 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 hCG_1642624A0A1W2PR95 340 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 TRIM43BA6NCK2 446 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 ARVCFO00192 962 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 ITGB8P26012 769 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 MAGEA10P43363 369 aaPredicted RBP13.18□□□□□ -0.3
YBX3-216ENST00000544622 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
YBX3-216ENST00000544622 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 TOB2Q14106 344 aaPredicted RBP13.18□□□□□ -0.3
YBX3-216ENST00000544622 NTRK3Q16288 839 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 LY6KQ17RY6 165 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 TYW1BQ6NUM6 668 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 CXCL17Q6UXB2 119 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 SH3RF1Q7Z6J0 888 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
YBX3-216ENST00000544622 COPS5Q92905 334 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms