RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	PITPNM2	Q9BZ72	1349 aa		7.76	□□□□□ -1.17
CPSF7-222	ENST00000544585	POLR2A	P24928	1970 aa	Known RBP	7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	RGS20	O76081	388 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	GYS2	P54840	703 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	PCBP4	P57723	403 aa	Known RBP	7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	GPSM2	P81274	684 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	PTPN11	Q06124	597 aa	Predicted RBP	7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	SREBF2	Q12772	1141 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	C2orf27A	Q580R0	203 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	ANGEL2	Q5VTE6	544 aa	Known RBP	7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	ADAMTSL4	Q6UY14	1074 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	PODN	Q7Z5L7	613 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	XAGE3	Q8WTP9	111 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	CELF1	Q92879	486 aa	Known RBP	7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	TNFRSF25	Q93038	417 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	PLEKHF1	Q96S99	279 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	TRIM33	Q9UPN9	1127 aa		7.75	□□□□□ -1.17
CPSF7-222	ENST00000544585	AKAP11	Q9UKA4	1901 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	UBE2Q2L	H0YL09	131 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	EIF4EBP3	O60516	100 aa	Predicted RBP	7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	GSTP1	P09211	210 aa	Known RBP	7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	CDC27	P30260	824 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	TRIM28	Q13263	835 aa	Known RBP	7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	RUFY4	Q6ZNE9	571 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	PDZD3	Q86UT5	571 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	PLBD2	Q8NHP8	589 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	KIFC2	Q96AC6	838 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	FAM89A	Q96GI7	184 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	FEZ1	Q99689	392 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	TM9SF2	Q99805	663 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	SENP2	Q9HC62	589 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	MYOZ2	Q9NPC6	264 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	PFDN2	Q9UHV9	154 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	LEMD3	Q9Y2U8	911 aa		7.74	□□□□□ -1.17
CPSF7-222	ENST00000544585	RTL9	Q8NET4	1388 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585		A0A1W2PQH9	124 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	CDC14C	A4D256	554 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	ANXA1	P04083	346 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	GUCY2C	P25092	1073 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	RIPK4	P57078	832 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	SQSTM1	Q13501	440 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	PROSER3	Q2NL68	480 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	GDF6	Q6KF10	455 aa	Predicted RBP	7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	NOL8	Q76FK4	1167 aa	Known RBP	7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	ARMC9	Q7Z3E5	817 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	TTC6	Q86TZ1	520 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	FAM178B	Q8IXR5	827 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	CACTIN-AS1	Q8N1I8	211 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	ZSCAN1	Q8NBB4	408 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	ISCA1	Q9BUE6	129 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	AVEN	Q9NQS1	362 aa	Predicted RBP	7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	FRRS1L	Q9P0K9	344 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	GGA1	Q9UJY5	639 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	PCDHA4	Q9UN74	947 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	SLC12A7	Q9Y666	1083 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585	MAPK8IP3	Q9UPT6	1336 aa		7.73	□□□□□ -1.17
CPSF7-222	ENST00000544585		H3BRJ5	948 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	SOX1	O00570	391 aa	Predicted RBP	7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	IRS4	O14654	1257 aa	Predicted RBP	7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	UFL1	O94874	794 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	ADH7	P40394	386 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	GSTM4	Q03013	218 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	SSRP1	Q08945	709 aa	Known RBP	7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	LMOD3	Q0VAK6	560 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	OTUD7B	Q6GQQ9	843 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	MOB2	Q70IA6	237 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	LPIN3	Q9BQK8	851 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	ANTXR1	Q9H6X2	564 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	AAAS	Q9NRG9	546 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	DBF4	Q9UBU7	674 aa	Predicted RBP	7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	NAGPA	Q9UK23	515 aa		7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	ASTN2	O75129	1339 aa	Predicted RBP	7.72	□□□□□ -1.17
CPSF7-222	ENST00000544585	MANSC4	A6NHS7	340 aa	Predicted RBP	7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	MEIS3P2	A8K0S8	358 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585		B2RBV5	119 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	NRG2	O14511	850 aa	Predicted RBP	7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	C2CD2L	O14523	706 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	TNRC18	O15417	2968 aa	Predicted RBP	7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	ST8SIA5	O15466	376 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	GFRA3	O60609	400 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	HTR3B	O95264	441 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	CYP11A1	P05108	521 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	EPHA1	P21709	976 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	ARL4D	P49703	201 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	ARHGEF6	Q15052	776 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	TCEA2	Q15560	299 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	SPATC1	Q76KD6	591 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	TMEM40	Q8WWA1	233 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	SLC7A3	Q8WY07	619 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	CORO1B	Q9BR76	489 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	SOX17	Q9H6I2	414 aa	Predicted RBP	7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	HYPK	Q9NX55	129 aa		7.71	□□□□□ -1.18
CPSF7-222	ENST00000544585	TRIM17	Q9Y577	477 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms