RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 NBPF20Q3BBV1 942 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 B4GALNT3Q6L9W6 998 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 CCDC62Q6P9F0 684 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 PNMA1Q8ND90 353 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 SCLYQ96I15 445 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 UBA5Q9GZZ9 404 aa16.26■□□□□ 0.19
SEMA4D-224ENST00000544513 RAD50Q92878 1312 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 B4DLN1 442 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 ARIH2O95376 493 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 PFKMP08237 780 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 MRPL12P52815 198 aaKnown RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 USH1GQ495M9 461 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 CWC27Q6UX04 472 aaKnown RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 ENAHQ8N8S7 591 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 SYMPKQ92797 1274 aaKnown RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 COPS5Q92905 334 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 ZSCAN10Q96SZ4 725 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 GAS2L1Q99501 681 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 NKX2-4Q9H2Z4 354 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 GPHNQ9NQX3 736 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 SLC4A7Q9Y6M7 1214 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 GBF1Q92538 1859 aa16.25■□□□□ 0.19
SEMA4D-224ENST00000544513 ABCB11O95342 1321 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 TXNP10599 105 aaKnown RBP16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 PTPN11Q06124 597 aaPredicted RBP16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 TTLL4Q14679 1199 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 CDC37Q16543 378 aaPredicted RBP16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 TJAP1Q5JTD0 557 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 ADGRF4Q8IZF3 695 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 SYTL5Q8TDW5 730 aaPredicted RBP16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 TBC1D5Q92609 795 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 DSCC1Q9BVC3 393 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 SLC28A3Q9HAS3 691 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 ZSWIM5Q9P217 1185 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 COL20A1Q9P218 1284 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 PCDHA11Q9Y5I1 949 aa16.24■□□□□ 0.19
SEMA4D-224ENST00000544513 B4E1Z4 1266 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 HIP1O00291 1037 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 RFC2P35250 354 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 RABGGTBP53611 331 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 NSUN6Q8TEA1 469 aaKnown RBP16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 TAAR1Q96RJ0 339 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 IWS1Q96ST2 819 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 KAT14Q9H8E8 782 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 JMJD4Q9H9V9 463 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 PRDM6Q9NQX0 595 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
SEMA4D-224ENST00000544513 MYOGP15173 224 aa16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 ATP2A2P16615 1042 aaKnown RBP16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 ARHGAP1Q07960 439 aa16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 QRICH1Q2TAL8 776 aa16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 ATXN2LQ8WWM7 1075 aaKnown RBP16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 CTAGE1Q96RT6 745 aa16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 SCN5AQ14524 2016 aa16.22■□□□□ 0.19
SEMA4D-224ENST00000544513 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 IQCF3P0C7M6 154 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 GHRHRQ02643 423 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 SESTD1Q86VW0 696 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 PPP1R13LQ8WUF5 828 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 AFG1LQ8WV93 481 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 KAT2BQ92831 832 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 RMDN3Q96TC7 470 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
SEMA4D-224ENST00000544513 TET1Q8NFU7 2136 aa16.21■□□□□ 0.18
SEMA4D-224ENST00000544513 ZBBXA8MT70 800 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 OPLAHO14841 1288 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 GH1P01241 217 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 LY6KQ17RY6 165 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 PPP2R2DQ66LE6 453 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 DEFB128Q7Z7B8 93 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 FBXO11Q86XK2 927 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 EMID1Q96A84 441 aaPredicted RBP16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 KRT23Q9C075 422 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 IL25Q9H293 177 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 CNNM2Q9H8M5 875 aa16.2■□□□□ 0.18
SEMA4D-224ENST00000544513 KIAA1217Q5T5P2 1943 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 EIF3JO75822 258 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 MMP3P08254 477 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 BFSP2Q13515 415 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 SEC23AQ15436 765 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 STXBP2Q15833 593 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 RETREG2Q8NC44 543 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 PHOSPHO2Q8TCD6 241 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 PPM1EQ8WY54 764 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 ASB2Q96Q27 587 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 THEGQ9P2T0 379 aa16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 DDX41Q9UJV9 622 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 PRRC2BQ5JSZ5 2229 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-224ENST00000544513 TANC1Q9C0D5 1861 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms