RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 KCNB2Q92953 911 aa16.14■□□□□ 0.17
VAMP1-208ENST00000544432 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
VAMP1-208ENST00000544432 A0A0U1RQG5 324 aaPredicted RBP16.13■□□□□ 0.17
VAMP1-208ENST00000544432 TRIM43BA6NCK2 446 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 DCDC2CA8MYV0 355 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 ARVCFO00192 962 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 CLTBP09497 229 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
VAMP1-208ENST00000544432 BEX3Q00994 111 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 STXBP2Q15833 593 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 DHX32Q7L7V1 743 aaKnown RBP16.13■□□□□ 0.17
VAMP1-208ENST00000544432 HOMER1Q86YM7 354 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 RASEFQ8IZ41 740 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 TDHQ8IZJ6 230 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 SLC43A3Q8NBI5 491 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 VTI1AQ96AJ9 217 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 TRIM43Q96BQ3 446 aaPredicted RBP16.13■□□□□ 0.17
VAMP1-208ENST00000544432 PPP4R2Q9NY27 417 aa16.13■□□□□ 0.17
VAMP1-208ENST00000544432 LAMA3Q16787 3333 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 PQBP1O60828 265 aaKnown RBP16.12■□□□□ 0.17
VAMP1-208ENST00000544432 CFBP00751 764 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 HMGB1P09429 215 aaKnown RBP16.12■□□□□ 0.17
VAMP1-208ENST00000544432 FAAP100Q0VG06 881 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 TTLL4Q14679 1199 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 PPP2R5BQ15173 497 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 TMEM63BQ5T3F8 832 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 ARHGEF16Q5VV41 709 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 CCDC62Q6P9F0 684 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 RRP36Q96EU6 259 aaKnown RBP16.12■□□□□ 0.17
VAMP1-208ENST00000544432 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 SLC12A7Q9Y666 1083 aa16.12■□□□□ 0.17
VAMP1-208ENST00000544432 BAZ2BQ9UIF8 2168 aaKnown RBP16.11■□□□□ 0.17
VAMP1-208ENST00000544432 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-208ENST00000544432 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
VAMP1-208ENST00000544432 EIF3JO75822 258 aaKnown RBP16.11■□□□□ 0.17
VAMP1-208ENST00000544432 NR3C2P08235 984 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 POLR2MP0CAP2 368 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 CPT1AP50416 773 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 BRDTQ58F21 947 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-208ENST00000544432 CXCL17Q6UXB2 119 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 SH3RF1Q7Z6J0 888 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
VAMP1-208ENST00000544432 FANCBQ8NB91 859 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 PRDM5Q9NQX1 630 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-208ENST00000544432 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 MYH6P13533 1939 aa16.11■□□□□ 0.17
VAMP1-208ENST00000544432 KPNA6O60684 536 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 REC8O95072 547 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 TXNP10599 105 aaKnown RBP16.1■□□□□ 0.17
VAMP1-208ENST00000544432 PTGS1P23219 599 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 SYNE3Q6ZMZ3 975 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 OR6J1Q8NGC5 347 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 PDCD2LQ9BRP1 358 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 TMEM39AQ9NV64 488 aa16.1■□□□□ 0.17
VAMP1-208ENST00000544432 A6NJR5 290 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 TLR3O15455 904 aaKnown RBP16.09■□□□□ 0.17
VAMP1-208ENST00000544432 EIF2AK2P19525 551 aaKnown RBP16.09■□□□□ 0.17
VAMP1-208ENST00000544432 HSPA4P34932 840 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 RCAN1P53805 252 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 ITGA7Q13683 1181 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 ADCK5Q3MIX3 580 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 GPR153Q6NV75 609 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 VSIG10LQ86VR7 867 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 FAM126BQ8IXS8 530 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 BADQ92934 168 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
VAMP1-208ENST00000544432 TBX21Q9UL17 535 aa16.09■□□□□ 0.17
VAMP1-208ENST00000544432 SZT2Q5T011 3432 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 ARIH2O95376 493 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 PLEKHA8P1O95397 391 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 CD4P01730 458 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-208ENST00000544432 ITGB8P26012 769 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 HOXA13P31271 388 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-208ENST00000544432 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
VAMP1-208ENST00000544432 KCNV1Q6PIU1 500 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 APOA5Q6Q788 366 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 SEPT14Q6ZU15 432 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 TMTC3Q6ZXV5 915 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
VAMP1-208ENST00000544432 GRIN2DO15399 1336 aa16.08■□□□□ 0.16
VAMP1-208ENST00000544432 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 TIMP1P01033 207 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 GH1P01241 217 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 RAG1P15918 1043 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 RXRAP19793 462 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 PGM5Q15124 567 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 FBXL16Q8N461 479 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 COPS5Q92905 334 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 EMID1Q96A84 441 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-208ENST00000544432 MTG1Q9BT17 334 aaPredicted RBP16.07■□□□□ 0.16
VAMP1-208ENST00000544432 PCDH10Q9P2E7 1040 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 DDX41Q9UJV9 622 aaKnown RBP16.07■□□□□ 0.16
VAMP1-208ENST00000544432 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
VAMP1-208ENST00000544432 LTBP2Q14767 1821 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms