RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 AKNAD1Q5T1N1 836 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 LRP10Q7Z4F1 713 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMG8-202ENST00000543872 RUBCNQ92622 972 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 MAGOHBQ96A72 148 aaKnown RBP13.98□□□□□ -0.17
SMG8-202ENST00000543872 NOX5Q96PH1 765 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 PIK3C2AO00443 1686 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
SMG8-202ENST00000543872 PP2D1A8MPX8 630 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 RAD51CO43502 376 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 PRLRP16471 622 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 RWDD2BP57060 319 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 XRCC4Q13426 336 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 SAAL1Q96ER3 474 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 ADAMTS13Q76LX8 1427 aa13.98□□□□□ -0.17
SMG8-202ENST00000543872 TMEM2Q9UHN6 1383 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 MINDY4BA8MYZ0 360 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 KLHDC7AQ5VTJ3 777 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 CAPRIN2Q6IMN6 1127 aaKnown RBP13.97□□□□□ -0.17
SMG8-202ENST00000543872 STRBPQ96SI9 672 aaKnown RBP13.97□□□□□ -0.17
SMG8-202ENST00000543872 TTYH3Q9C0H2 523 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 EPHB6O15197 1021 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 MGRN1O60291 552 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 CCDC178Q5BJE1 867 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 CD302Q8IX05 232 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 WHAMMQ8TF30 809 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 SPAG5Q96R06 1193 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 FAM167BQ9BTA0 163 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 THAP9Q9H5L6 903 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 EPB41L4AQ9HCS5 686 aaPredicted RBP13.97□□□□□ -0.17
SMG8-202ENST00000543872 GGT7Q9UJ14 662 aa13.97□□□□□ -0.17
SMG8-202ENST00000543872 SLC1A4P43007 532 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 PPP2R2AP63151 447 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 BYSLQ13895 437 aaKnown RBP13.96□□□□□ -0.17
SMG8-202ENST00000543872 IL17AQ16552 155 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 KRT71Q3SY84 523 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 MAGEC3Q8TD91 643 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 RAPGEF4Q8WZA2 1011 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 HOOK2Q96ED9 719 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 NLRP2Q9NX02 1062 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 SNUPNO95149 360 aaKnown RBP13.96□□□□□ -0.17
SMG8-202ENST00000543872 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
SMG8-202ENST00000543872 LPIN2Q92539 896 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 KRT23Q9C075 422 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 TRPC6Q9Y210 931 aa13.96□□□□□ -0.17
SMG8-202ENST00000543872 PALMO75781 387 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 TRIM37O94972 964 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 KIF4AO95239 1232 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 PLEKHA8P1O95397 391 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 BMP15O95972 392 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 MYBL1P10243 752 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 TNFRSF8P28908 595 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 SLC8A3P57103 927 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 RBBP5Q15291 538 aaKnown RBP13.96□□□□□ -0.18
SMG8-202ENST00000543872 BZW1Q7L1Q6 419 aaKnown RBP13.96□□□□□ -0.18
SMG8-202ENST00000543872 ZNF572Q7Z3I7 529 aaPredicted RBP13.96□□□□□ -0.18
SMG8-202ENST00000543872 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 CCT6BQ92526 530 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 SLC12A6Q9UHW9 1150 aa13.96□□□□□ -0.18
SMG8-202ENST00000543872 CIAO1O76071 339 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 CLSTN1O94985 981 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 ARID5AQ03989 594 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 ANKRD40Q6AI12 368 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 RCSD1Q6JBY9 416 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 MAGEB6Q8N7X4 407 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 RETREG2Q8NC44 543 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 NLRC4Q9NPP4 1024 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
SMG8-202ENST00000543872 RPS6KA3P51812 740 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 ATP2C1P98194 919 aaPredicted RBP13.95□□□□□ -0.18
SMG8-202ENST00000543872 ZNF844Q08AG5 666 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 THEMIS2Q5TEJ8 643 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 CACNA2D4Q7Z3S7 1137 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 HPS3Q969F9 1004 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 FAM89AQ96GI7 184 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
SMG8-202ENST00000543872 TAF1DQ9H5J8 278 aaPredicted RBP13.95□□□□□ -0.18
SMG8-202ENST00000543872 PANK4Q9NVE7 773 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 SMIM23A6NLE4 172 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 CCT8L1PA6NM43 557 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 NLRP5P59047 1200 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 HLFQ16534 295 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 EMC10Q5UCC4 262 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 TTI2Q6NXR4 508 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 RUFY4Q6ZNE9 571 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 CCDC197Q8NCU1 140 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 SELENOSQ9BQE4 189 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 CNNM2Q9H8M5 875 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 SLC39A2Q9NP94 309 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 FBXL5Q9UKA1 691 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 C15orf41Q9Y2V0 281 aa13.95□□□□□ -0.18
SMG8-202ENST00000543872 TLDC2A0PJX2 215 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 LRRC53A6NM62 1247 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 ERVK-9P63128 1117 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 PKN1Q16512 942 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms