RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 CCDC69A6NI79 296 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 ARVCFO00192 962 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 KIAA0355O15063 1070 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 ZEB2O60315 1214 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 CABYRO75952 493 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 KIF5BP33176 963 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 LIFRP42702 1097 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 GHRHRQ02643 423 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 TMEM39AQ9NV64 488 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 DNAH12Q6ZR08 3092 aa16.57■□□□□ 0.24
VPS37B-204ENST00000543590 ITGB8P26012 769 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 ARHGEF16Q5VV41 709 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 PIBF1Q8WXW3 757 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 MAP3K20Q9NYL2 800 aaKnown RBP16.56■□□□□ 0.24
VPS37B-204ENST00000543590 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
VPS37B-204ENST00000543590 NKRFO15226 690 aaKnown RBP eCLIP16.55■□□□□ 0.24
VPS37B-204ENST00000543590 TXNP10599 105 aaKnown RBP16.55■□□□□ 0.24
VPS37B-204ENST00000543590 EIF2AK2P19525 551 aaKnown RBP16.55■□□□□ 0.24
VPS37B-204ENST00000543590 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 HOXA13P31271 388 aaPredicted RBP16.55■□□□□ 0.24
VPS37B-204ENST00000543590 STXBP2Q15833 593 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 LRIT3Q3SXY7 679 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 RASEFQ8IZ41 740 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 SAMD3Q8N6K7 520 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 SLC43A3Q8NBI5 491 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 OR6J1Q8NGC5 347 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 LRCH3Q96II8 777 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 PXMP2Q9NR77 195 aa16.55■□□□□ 0.24
VPS37B-204ENST00000543590 NR3C2P08235 984 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 CALM1P0DP23 149 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 CALM2P0DP24 149 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 CALM3P0DP25 149 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 RAG1P15918 1043 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 RXRAP19793 462 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 GNAQP50148 359 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 ITGA7Q13683 1181 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 TTLL4Q14679 1199 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 CCDC62Q6P9F0 684 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 SEPT14Q6ZU15 432 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 FAM126BQ8IXS8 530 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 COPS5Q92905 334 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 RRP36Q96EU6 259 aaKnown RBP16.54■□□□□ 0.24
VPS37B-204ENST00000543590 LZTS2Q9BRK4 669 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 SLC12A7Q9Y666 1083 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 GCOM1H8Y6P7 765 aaPredicted RBP16.54■□□□□ 0.24
VPS37B-204ENST00000543590 ARIH2O95376 493 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 POLR2MP0CAP2 368 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 CPT1AP50416 773 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 PSMC6P62333 389 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 EXOSC10Q01780 885 aaKnown RBP16.54■□□□□ 0.24
VPS37B-204ENST00000543590 ADCK5Q3MIX3 580 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 SRBD1Q8N5C6 995 aaKnown RBP16.54■□□□□ 0.24
VPS37B-204ENST00000543590 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 TBX21Q9UL17 535 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 GRIN2DO15399 1336 aa16.54■□□□□ 0.24
VPS37B-204ENST00000543590 TLR3O15455 904 aaKnown RBP16.53■□□□□ 0.24
VPS37B-204ENST00000543590 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
VPS37B-204ENST00000543590 MYL3P08590 195 aa16.53■□□□□ 0.24
VPS37B-204ENST00000543590 PURAQ00577 322 aaKnown RBP16.53■□□□□ 0.24
VPS37B-204ENST00000543590 KRT32Q14532 448 aa16.53■□□□□ 0.24
VPS37B-204ENST00000543590 BRDTQ58F21 947 aaPredicted RBP16.53■□□□□ 0.24
VPS37B-204ENST00000543590 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
VPS37B-204ENST00000543590 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
VPS37B-204ENST00000543590 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
VPS37B-204ENST00000543590 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
VPS37B-204ENST00000543590 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
VPS37B-204ENST00000543590 PDCD2LQ9BRP1 358 aa16.53■□□□□ 0.24
VPS37B-204ENST00000543590 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
VPS37B-204ENST00000543590 A6NJR5 290 aa16.52■□□□□ 0.23
VPS37B-204ENST00000543590 TIMP1P01033 207 aa16.52■□□□□ 0.23
VPS37B-204ENST00000543590 CD4P01730 458 aa16.52■□□□□ 0.23
VPS37B-204ENST00000543590 SHHQ15465 462 aa16.52■□□□□ 0.23
VPS37B-204ENST00000543590 LY6KQ17RY6 165 aa16.52■□□□□ 0.23
VPS37B-204ENST00000543590 TCEANC2Q96MN5 208 aa16.52■□□□□ 0.23
VPS37B-204ENST00000543590 SEC63Q9UGP8 760 aaKnown RBP16.52■□□□□ 0.23
VPS37B-204ENST00000543590 GH1P01241 217 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
VPS37B-204ENST00000543590 PGM5Q15124 567 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 C9orf50Q5SZB4 431 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 APOA5Q6Q788 366 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 KCNB2Q92953 911 aa16.51■□□□□ 0.23
VPS37B-204ENST00000543590 MTG1Q9BT17 334 aaPredicted RBP16.51■□□□□ 0.23
VPS37B-204ENST00000543590 KPNA6O60684 536 aa16.5■□□□□ 0.23
VPS37B-204ENST00000543590 EPHB4P54760 987 aa16.5■□□□□ 0.23
VPS37B-204ENST00000543590 FPGSQ05932 587 aa16.5■□□□□ 0.23
VPS37B-204ENST00000543590 ARHGAP1Q07960 439 aa16.5■□□□□ 0.23
VPS37B-204ENST00000543590 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
VPS37B-204ENST00000543590 VSIG10LQ86VR7 867 aa16.5■□□□□ 0.23
VPS37B-204ENST00000543590 TRPV6Q9H1D0 765 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms