RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 CPLX1O14810 134 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 PFKFB2O60825 505 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 SCG2P13521 617 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 HOXA13P31271 388 aaPredicted RBP21.17■□□□□ 0.98
COPS7A-216ENST00000543170 PDE4DQ08499 809 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 SCRN1Q12765 414 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 CCDC144BQ3MJ40 725 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 ARHGEF16Q5VV41 709 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 FBXO16Q8IX29 292 aaPredicted RBP21.17■□□□□ 0.98
COPS7A-216ENST00000543170 LARP6Q9BRS8 491 aaKnown RBP21.17■□□□□ 0.98
COPS7A-216ENST00000543170 PSTPIP2Q9H939 334 aa21.17■□□□□ 0.98
COPS7A-216ENST00000543170 MKI67P46013 3256 aaKnown RBP21.17■□□□□ 0.98
COPS7A-216ENST00000543170 RBM47A0AV96 593 aaKnown RBP21.16■□□□□ 0.98
COPS7A-216ENST00000543170 DUSP11O75319 330 aaKnown RBP21.16■□□□□ 0.98
COPS7A-216ENST00000543170 MNX1P50219 401 aaPredicted RBP21.16■□□□□ 0.98
COPS7A-216ENST00000543170 NAPAP54920 295 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 AKAP17AQ02040 695 aaKnown RBP21.16■□□□□ 0.98
COPS7A-216ENST00000543170 STK3Q13188 491 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 PKN1Q16512 942 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 TAPT1Q6NXT6 567 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 TRIM22Q8IYM9 498 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 SMARCC2Q8TAQ2 1214 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 PHKBQ93100 1093 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 TBC1D32Q96NH3 1257 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 PDCD2LQ9BRP1 358 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 BACH2Q9BYV9 841 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 GLT8D2Q9H1C3 349 aa21.16■□□□□ 0.98
COPS7A-216ENST00000543170 ESYT2A0FGR8 921 aa21.15■□□□□ 0.98
COPS7A-216ENST00000543170 DNM1LO00429 736 aa21.15■□□□□ 0.98
COPS7A-216ENST00000543170 CDKL5O76039 1030 aa21.15■□□□□ 0.98
COPS7A-216ENST00000543170 EIF2AK2P19525 551 aaKnown RBP21.15■□□□□ 0.98
COPS7A-216ENST00000543170 RABEP1Q15276 862 aa21.15■□□□□ 0.98
COPS7A-216ENST00000543170 TYW1BQ6NUM6 668 aa21.15■□□□□ 0.98
COPS7A-216ENST00000543170 CCDC12Q8WUD4 166 aaPredicted RBP21.15■□□□□ 0.98
COPS7A-216ENST00000543170 SLC26A6Q9BXS9 759 aa21.15■□□□□ 0.98
COPS7A-216ENST00000543170 XPNPEP3Q9NQH7 507 aa21.15■□□□□ 0.98
COPS7A-216ENST00000543170 DDX49Q9Y6V7 483 aaKnown RBP21.15■□□□□ 0.98
COPS7A-216ENST00000543170 STK36Q9NRP7 1315 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 NR3C2P08235 984 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 MLLT1Q03111 559 aaPredicted RBP21.14■□□□□ 0.97
COPS7A-216ENST00000543170 PGM5Q15124 567 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 STXBP2Q15833 593 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 IQSEC1Q6DN90 963 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 EEPD1Q7L9B9 569 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 ARRDC4Q8NCT1 418 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 RIC8AQ9NPQ8 531 aa21.14■□□□□ 0.97
COPS7A-216ENST00000543170 SYNRGQ9UMZ2 1314 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 ADCY6O43306 1168 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 ADAMTS4O75173 837 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 DEXIO95424 95 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 CST5P28325 142 aaPredicted RBP21.13■□□□□ 0.97
COPS7A-216ENST00000543170 ADCYAP1R1P41586 468 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 ADCY7P51828 1080 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 NKX3-2P78367 333 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 TNFAIP2Q03169 654 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 SSRP1Q08945 709 aaKnown RBP21.13■□□□□ 0.97
COPS7A-216ENST00000543170 ME3Q16798 604 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 ANO1Q5XXA6 986 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 USP17L6PQ6QN14 398 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 NECAB2Q7Z6G3 386 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 FCHSD1Q86WN1 690 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 FAM177A1Q8N128 213 aaPredicted RBP21.13■□□□□ 0.97
COPS7A-216ENST00000543170 CCDC148Q8NFR7 591 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 SCFD2Q8WU76 684 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 GTF3C6Q969F1 213 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 UPF3AQ9H1J1 476 aaKnown RBP21.13■□□□□ 0.97
COPS7A-216ENST00000543170 GNEQ9Y223 722 aaKnown RBP21.13■□□□□ 0.97
COPS7A-216ENST00000543170 Q9Y3F1 56 aa21.13■□□□□ 0.97
COPS7A-216ENST00000543170 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.12■□□□□ 0.97
COPS7A-216ENST00000543170 EIF3JO75822 258 aaKnown RBP21.12■□□□□ 0.97
COPS7A-216ENST00000543170 STAM2O75886 525 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 COL6A1P12109 1028 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 GJA9P57773 515 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 LRRC41Q15345 812 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 RNF180Q86T96 592 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 DIS3LQ8TF46 1054 aaKnown RBP21.12■□□□□ 0.97
COPS7A-216ENST00000543170 LENG1Q96BZ8 264 aaPredicted RBP21.12■□□□□ 0.97
COPS7A-216ENST00000543170 ZMYND12Q9H0C1 365 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 SH3GLB2Q9NR46 395 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 PDGFCQ9NRA1 345 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 LIMCH1Q9UPQ0 1083 aa21.12■□□□□ 0.97
COPS7A-216ENST00000543170 SMCO2A6NFE2 343 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 NKRFO15226 690 aaKnown RBP eCLIP21.11■□□□□ 0.97
COPS7A-216ENST00000543170 LARGE1O95461 756 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 SMPD1P17405 629 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 CCND2P30279 289 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 AP3B2Q13367 1082 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 DUSP28Q4G0W2 176 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 XRRA1Q6P2D8 792 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 VSIG10LQ86VR7 867 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 PAWRQ96IZ0 340 aaKnown RBP21.11■□□□□ 0.97
COPS7A-216ENST00000543170 C11orf49Q9H6J7 331 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 SPC25Q9HBM1 224 aa21.11■□□□□ 0.97
COPS7A-216ENST00000543170 SPDYE3A6NKU9 549 aa21.1■□□□□ 0.97
COPS7A-216ENST00000543170 KBTBD13C9JR72 458 aa21.1■□□□□ 0.97
COPS7A-216ENST00000543170 FOSP01100 380 aaPredicted RBP21.1■□□□□ 0.97
COPS7A-216ENST00000543170 CLK2P49760 499 aaKnown RBP21.1■□□□□ 0.97
COPS7A-216ENST00000543170 UBE2SQ16763 222 aa21.1■□□□□ 0.97
COPS7A-216ENST00000543170 NOL8Q76FK4 1167 aaKnown RBP21.1■□□□□ 0.97
COPS7A-216ENST00000543170 TLK2Q86UE8 772 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms