RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 IFFO2Q5TF58 517 aa23.82■■□□□ 1.4
OTUB1-211ENST00000543004 GALNT17Q6IS24 598 aa23.82■■□□□ 1.4
OTUB1-211ENST00000543004 FAM177A1Q8N128 213 aaPredicted RBP23.82■■□□□ 1.4
OTUB1-211ENST00000543004 SAMD3Q8N6K7 520 aa23.82■■□□□ 1.4
OTUB1-211ENST00000543004 BICD2Q8TD16 824 aa23.82■■□□□ 1.4
OTUB1-211ENST00000543004 MAML3Q96JK9 1138 aa23.82■■□□□ 1.4
OTUB1-211ENST00000543004 ZFP91Q96JP5 570 aaPredicted RBP23.82■■□□□ 1.4
OTUB1-211ENST00000543004 LRRC37A2A6NM11 1700 aa23.82■■□□□ 1.4
OTUB1-211ENST00000543004 IL31RAQ8NI17 732 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 TNFRSF25Q93038 417 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 ANO3Q9BYT9 981 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 GLT8D2Q9H1C3 349 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 PXMP2Q9NR77 195 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 SPDYE3A6NKU9 549 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 HOXC6P09630 235 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 ALDH5A1P51649 535 aaPredicted RBP23.81■■□□□ 1.4
OTUB1-211ENST00000543004 APBA2Q99767 749 aa23.81■■□□□ 1.4
OTUB1-211ENST00000543004 GNRH1P01148 92 aa23.8■■□□□ 1.4
OTUB1-211ENST00000543004 PDCP20941 246 aa23.8■■□□□ 1.4
OTUB1-211ENST00000543004 HOXD10P28358 340 aa23.8■■□□□ 1.4
OTUB1-211ENST00000543004 ARHGEF16Q5VV41 709 aa23.8■■□□□ 1.4
OTUB1-211ENST00000543004 MCTP1Q6DN14 999 aa23.8■■□□□ 1.4
OTUB1-211ENST00000543004 MAF1Q9H063 256 aa23.8■■□□□ 1.4
OTUB1-211ENST00000543004 MTMR6Q9Y217 621 aa23.8■■□□□ 1.4
OTUB1-211ENST00000543004 RPTORQ8N122 1335 aa23.79■■□□□ 1.4
OTUB1-211ENST00000543004 STX6O43752 255 aa23.79■■□□□ 1.4
OTUB1-211ENST00000543004 ELNP15502 786 aa23.79■■□□□ 1.4
OTUB1-211ENST00000543004 ARHGEF6Q15052 776 aa23.79■■□□□ 1.4
OTUB1-211ENST00000543004 SAFBQ15424 915 aaKnown RBP eCLIP23.79■■□□□ 1.4
OTUB1-211ENST00000543004 FERMT3Q86UX7 667 aa23.79■■□□□ 1.4
OTUB1-211ENST00000543004 NSUN6Q8TEA1 469 aaKnown RBP23.79■■□□□ 1.4
OTUB1-211ENST00000543004 PDCD2LQ9BRP1 358 aa23.79■■□□□ 1.4
OTUB1-211ENST00000543004 BRMS1Q9HCU9 246 aa23.79■■□□□ 1.4
OTUB1-211ENST00000543004 DAXXQ9UER7 740 aaPredicted RBP23.79■■□□□ 1.4
OTUB1-211ENST00000543004 AP3B2Q13367 1082 aa23.78■■□□□ 1.4
OTUB1-211ENST00000543004 PGM5Q15124 567 aa23.78■■□□□ 1.4
OTUB1-211ENST00000543004 FOXD4L5Q5VV16 416 aaPredicted RBP23.78■■□□□ 1.4
OTUB1-211ENST00000543004 PIK3AP1Q6ZUJ8 805 aa23.78■■□□□ 1.4
OTUB1-211ENST00000543004 DNERQ8NFT8 737 aa23.78■■□□□ 1.4
OTUB1-211ENST00000543004 FOXD4L4Q8WXT5 416 aaPredicted RBP23.78■■□□□ 1.4
OTUB1-211ENST00000543004 TRIB2Q92519 343 aa23.78■■□□□ 1.4
OTUB1-211ENST00000543004 ADD3Q9UEY8 706 aaKnown RBP23.78■■□□□ 1.4
OTUB1-211ENST00000543004 DIS3Q9Y2L1 958 aaKnown RBP23.78■■□□□ 1.4
OTUB1-211ENST00000543004 PTCH2Q9Y6C5 1203 aa23.78■■□□□ 1.4
OTUB1-211ENST00000543004 FRMPD4Q14CM0 1322 aa23.78■■□□□ 1.4
OTUB1-211ENST00000543004 EDIL3O43854 480 aa23.77■■□□□ 1.4
OTUB1-211ENST00000543004 RAET1EQ8TD07 263 aa23.77■■□□□ 1.4
OTUB1-211ENST00000543004 SLC5A4Q9NY91 659 aa23.77■■□□□ 1.4
OTUB1-211ENST00000543004 FOSP01100 380 aaPredicted RBP23.77■■□□□ 1.4
OTUB1-211ENST00000543004 MYCLP12524 364 aaPredicted RBP23.77■■□□□ 1.4
OTUB1-211ENST00000543004 XRCC5P13010 732 aaKnown RBP23.77■■□□□ 1.4
OTUB1-211ENST00000543004 CYP2C19P33261 490 aa23.77■■□□□ 1.4
OTUB1-211ENST00000543004 TRIM32Q13049 653 aa23.77■■□□□ 1.4
OTUB1-211ENST00000543004 IPO9Q96P70 1041 aaKnown RBP23.77■■□□□ 1.4
OTUB1-211ENST00000543004 CCDC194A0A1B0GVG4 234 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 NR3C2P08235 984 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 U2AF2P26368 475 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■□□□□ 10.6
OTUB1-211ENST00000543004 IRF5Q13568 498 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 GNL2Q13823 731 aaKnown RBP23.76■■□□□ 1.39
OTUB1-211ENST00000543004 INF2Q27J81 1249 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 ARMCX2Q7L311 632 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 EEPD1Q7L9B9 569 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 TBCKQ8TEA7 893 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 TINF2Q9BSI4 451 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 FOXP1Q9H334 677 aaPredicted RBP23.76■■□□□ 1.39
OTUB1-211ENST00000543004 PTPN22Q9Y2R2 807 aa23.76■■□□□ 1.39
OTUB1-211ENST00000543004 ADCY3O60266 1144 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 IGHA2P01877 340 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 EDNRBP24530 442 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 DDIT3P35638 169 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 SREBF1P36956 1147 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 MRPS9P82933 396 aaKnown RBP23.75■■□□□ 1.39
OTUB1-211ENST00000543004 KRT25Q7Z3Z0 450 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 CTU1Q7Z7A3 348 aaKnown RBP23.75■■□□□ 1.39
OTUB1-211ENST00000543004 ZNF467Q7Z7K2 595 aaPredicted RBP23.75■■□□□ 1.39
OTUB1-211ENST00000543004 TEX2Q8IWB9 1127 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 CRYGNQ8WXF5 182 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 KIAA1217Q5T5P2 1943 aa23.75■■□□□ 1.39
OTUB1-211ENST00000543004 BRCA2P51587 3418 aa23.74■■□□□ 1.39
OTUB1-211ENST00000543004 WNT7AO00755 349 aa23.74■■□□□ 1.39
OTUB1-211ENST00000543004 SNAI1O95863 264 aaPredicted RBP23.74■■□□□ 1.39
OTUB1-211ENST00000543004 ARHGAP4P98171 946 aa23.74■■□□□ 1.39
OTUB1-211ENST00000543004 NONOQ15233 471 aaKnown RBP eCLIP23.74■■□□□ 1.39
OTUB1-211ENST00000543004 PRAMEF19Q5SWL8 479 aa23.74■■□□□ 1.39
OTUB1-211ENST00000543004 MAMDC4Q6UXC1 1216 aa23.74■■□□□ 1.39
OTUB1-211ENST00000543004 NOSTRINQ8IVI9 506 aa23.74■■□□□ 1.39
OTUB1-211ENST00000543004 RTEL1Q9NZ71 1219 aa23.74■■□□□ 1.39
OTUB1-211ENST00000543004 OLFML2BQ68BL8 750 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 VSIG10LQ86VR7 867 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 MORC4Q8TE76 937 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.73■■□□□ 1.39
OTUB1-211ENST00000543004 ZDHHC9Q9Y397 364 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 ASB14A6NK59 587 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 PRMT2P55345 433 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 PDE4DQ08499 809 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 CYP2W1Q8TAV3 490 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 IWS1Q96ST2 819 aa23.73■■□□□ 1.39
OTUB1-211ENST00000543004 RESTQ13127 1097 aa23.72■■□□□ 1.39
OTUB1-211ENST00000543004 PCNX4Q63HM2 1172 aa23.72■■□□□ 1.39
OTUB1-211ENST00000543004 MCTP2Q6DN12 878 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms