RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 POTEB2H3BUK9 544 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 RGS20O76081 388 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 GNA11P29992 359 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 CTCFP49711 727 aaPredicted RBP12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 ALDH5A1P51649 535 aaPredicted RBP12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 MRPS9P82933 396 aaKnown RBP12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 IRF5Q13568 498 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 FCHSD1Q86WN1 690 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 REXO1Q8N1G1 1221 aaKnown RBP12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 SOCS4Q8WXH5 440 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 IPO9Q96P70 1041 aaKnown RBP12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 RMDN3Q96TC7 470 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 NUDT12Q9BQG2 462 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 PDCD2LQ9BRP1 358 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 ANO3Q9BYT9 981 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 PXMP2Q9NR77 195 aa12.23□□□□□ -0.45
NPIPB3-210ENST00000542817 STX6O43752 255 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 BRD1O95696 1058 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 SNAI1O95863 264 aaPredicted RBP12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 CYP2B6P20813 491 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 KRT2P35908 639 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 SREBF1P36956 1147 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 RESTQ13127 1097 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 VSIG10LQ86VR7 867 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 TRIB2Q92519 343 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 APBA2Q99767 749 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 FOXP1Q9H334 677 aaPredicted RBP12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 IVNS1ABPQ9Y6Y0 642 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 LRRC37A2A6NM11 1700 aa12.22□□□□□ -0.45
NPIPB3-210ENST00000542817 GNRH1P01148 92 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 XBP1P17861 261 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 EIF2AK2P19525 551 aaKnown RBP12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 PDCP20941 246 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 RGS2P41220 211 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 UBXN2AP68543 259 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 TRIM32Q13049 653 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 KIF22Q14807 665 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 PGM5Q15124 567 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 OLFML2BQ68BL8 750 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 CCAR1Q8IX12 1150 aaKnown RBP12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 TRPV1Q8NER1 839 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 CYP2W1Q8TAV3 490 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 BICD2Q8TD16 824 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 NSUN6Q8TEA1 469 aaKnown RBP12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 LENG9Q96B70 501 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 TRIM17Q9Y577 477 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 PLXNA1Q9UIW2 1896 aa12.21□□□□□ -0.45
NPIPB3-210ENST00000542817 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 NR3C2P08235 984 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 CYP3A4P08684 503 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 ITGB5P18084 799 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 CIITAP33076 1130 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 ARHGAP4P98171 946 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 TRIM29Q14134 588 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 TMEM63BQ5T3F8 832 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 PIK3AP1Q6ZUJ8 805 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 ARMCX2Q7L311 632 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 DPP9Q86TI2 863 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 TBCKQ8TEA7 893 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 MBOAT7Q96N66 472 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 TINF2Q9BSI4 451 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 PTPN22Q9Y2R2 807 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 KIF3AQ9Y496 699 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 MCM3APO60318 1980 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
NPIPB3-210ENST00000542817 SYNGAP1Q96PV0 1343 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 IGLV3-22A0A075B6J6 115 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 CYP3A7-CYP3A51PA0A087WV96 503 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 LOC102724159A0A0B4J2E5 919 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 VPS37CA5D8V6 355 aaPredicted RBP12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 FAM86B1E9PN63 330 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 HSP90AA1P07900 732 aaKnown RBP12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 FAM86B2P0C5J1 330 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 ZNF865P0CJ78 1059 aaPredicted RBP12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 ELNP15502 786 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 CYP3A7P24462 503 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 CYP2C19P33261 490 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 PWP2Q15269 919 aaKnown RBP12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 INF2Q27J81 1249 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 PRAMEF19Q5SWL8 479 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 MAP3K21Q5TCX8 1036 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 ARHGEF16Q5VV41 709 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 PCNX4Q63HM2 1172 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 TAPT1Q6NXT6 567 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 FAM173BQ6P4H8 233 aa12.19□□□□□ -0.46
NPIPB3-210ENST00000542817 KRT25Q7Z3Z0 450 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms