RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TRIM27P14373 513 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 NAT1P18440 290 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 CCND1P24385 295 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 HOXC12P31275 282 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 ADCYAP1R1P41586 468 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 ZNF445P59923 1031 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 MSMPQ1L6U9 139 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 EXOSC6Q5RKV6 272 aaKnown RBP5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 NOL9Q5SY16 702 aaKnown RBP5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 STYK1Q6J9G0 422 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 PAOXQ6QHF9 649 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 USP53Q70EK8 1073 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 UBE3DQ7Z6J8 389 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 TPH2Q8IWU9 490 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 ABI1Q8IZP0 508 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 NXPE1Q8N323 547 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 PNISRQ8TF01 805 aaKnown RBP5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 XAGE3Q8WTP9 111 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 C1orf159Q96HA4 380 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 METTL22Q9BUU2 404 aaPredicted RBP5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 NKX2-4Q9H2Z4 354 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 ATXN3LQ9H3M9 355 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 PRDM11Q9NQV5 511 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 DISC1Q9NRI5 854 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 AP4E1Q9UPM8 1137 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 PCDHB12Q9Y5F1 795 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 PCDHA9Q9Y5H5 950 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 ASXL2Q76L83 1435 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 DCAF1Q9Y4B6 1507 aa5.02□□□□□ -1.61
SFSWAP-211ENST00000542813 CBX4O00257 560 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 GAS7O60861 476 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 GLRX3O76003 335 aaKnown RBP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 FKBP9O95302 570 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 MT-CO1P00395 513 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 CPP00450 1065 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 PRNPP04156 253 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 SCG5P05408 212 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 NEFMP07197 916 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 IARSP41252 1262 aaKnown RBP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 ECI1P42126 302 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 USP11P51784 963 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 GUCY1A3Q02108 690 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 DSG1Q02413 1049 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 TTLL4Q14679 1199 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 PPP2R5DQ14738 602 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 NFKBIBQ15653 356 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 PRSS53Q2L4Q9 553 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 MINDY4Q4G0A6 757 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 SLC35F1Q5T1Q4 408 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 ABHD17CQ6PCB6 329 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 FKBP9P1Q75LS8 142 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 VSIG10LQ86VR7 867 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 CBARPQ8N350 705 aaPredicted RBP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 SMC1BQ8NDV3 1235 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 USP33Q8TEY7 942 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 PPP1R13LQ8WUF5 828 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 DCAF4Q8WV16 495 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 TIFAQ96CG3 184 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 FUBP3Q96I24 572 aaKnown RBP eCLIP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 FBXL18Q96ME1 805 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 KREMEN1Q96MU8 473 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 SLC13A1Q9BZW2 595 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 MAF1Q9H063 256 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 NOL6Q9H6R4 1146 aaKnown RBP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 TCF7L1Q9HCS4 588 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 CYP26B1Q9NR63 512 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 GNL3LQ9NVN8 582 aaKnown RBP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 CCDC39Q9UFE4 941 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 USP25Q9UHP3 1055 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 FBXL21Q9UKT6 434 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 INTUQ9ULD6 942 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 PNMA8BQ9ULN7 279 aaPredicted RBP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 DIS3Q9Y2L1 958 aaKnown RBP5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 FHOD1Q9Y613 1164 aa5.01□□□□□ -1.61
SFSWAP-211ENST00000542813 ULK1O75385 1050 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 PF4V1P10720 104 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 KCNA6P17658 529 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 LSSP48449 732 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 ERVK-21P61565 698 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 FAPQ12884 760 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 PICALMQ13492 652 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 MORC3Q14149 939 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 NBPF9Q3BBW0 867 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 RGL3Q3MIN7 710 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 ATP13A4Q4VNC1 1196 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 MTDHQ86UE4 582 aaKnown RBP5□□□□□ -1.61
SFSWAP-211ENST00000542813 SPICE1Q8N0Z3 855 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 FIBCD1Q8N539 461 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 SYTL5Q8TDW5 730 aaPredicted RBP5□□□□□ -1.61
SFSWAP-211ENST00000542813 FBLIM1Q8WUP2 373 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 ISL2Q96A47 359 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 E2F7Q96AV8 911 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 GPR101Q96P66 508 aaPredicted RBP5□□□□□ -1.61
SFSWAP-211ENST00000542813 SARGQ9BW04 601 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 YIPF2Q9BWQ6 316 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 FOXQ1Q9C009 403 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 EMC7Q9NPA0 242 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 TAGLN3Q9UI15 199 aa5□□□□□ -1.61
SFSWAP-211ENST00000542813 ANKRD6Q9Y2G4 727 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms