RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 DNM1LO00429 736 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 CIAO1O76071 339 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 HOXA7P31268 230 aaPredicted RBP9.8□□□□□ -0.84
CLPB-211ENST00000542555 BACE1P56817 501 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 RTP1P59025 263 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 ERVK-24P63145 666 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 GORABQ5T7V8 394 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 SH3PXD2AQ5TCZ1 1133 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 GPR142Q7Z601 462 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 LPAR1Q92633 364 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 FAM122AQ96E09 287 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 HSH2DQ96JZ2 352 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 WDR18Q9BV38 432 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 SIL1Q9H173 461 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 DHX36Q9H2U1 1008 aaKnown RBP9.8□□□□□ -0.84
CLPB-211ENST00000542555 GINM1Q9NU53 330 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.8□□□□□ -0.84
CLPB-211ENST00000542555 PI4KBQ9UBF8 816 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 DDX20Q9UHI6 824 aaKnown RBP9.8□□□□□ -0.84
CLPB-211ENST00000542555 SLC6A14Q9UN76 642 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 HCN4Q9Y3Q4 1203 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 MYH13Q9UKX3 1938 aa9.8□□□□□ -0.84
CLPB-211ENST00000542555 FAM196BA6NMK8 535 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 BAG3O95817 575 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 IL15P40933 162 aaPredicted RBP9.79□□□□□ -0.84
CLPB-211ENST00000542555 PHKA1P46020 1223 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 EPHA4P54764 986 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 PSMA6P60900 246 aaKnown RBP9.79□□□□□ -0.84
CLPB-211ENST00000542555 MVPQ14764 893 aaKnown RBP9.79□□□□□ -0.84
CLPB-211ENST00000542555 SHHQ15465 462 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 CCDC102BQ68D86 513 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 ATF7IPQ6VMQ6 1270 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 DMRTC2Q8IXT2 367 aaPredicted RBP9.79□□□□□ -0.84
CLPB-211ENST00000542555 TEX11Q8IYF3 940 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 DDX4Q9NQI0 724 aaKnown RBP9.79□□□□□ -0.84
CLPB-211ENST00000542555 AKAP2Q9Y2D5 859 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 PTPRCP08575 1304 aa9.79□□□□□ -0.84
CLPB-211ENST00000542555 GPR75-ASB3A0A0A6YYF3 556 aa9.78□□□□□ -0.84
CLPB-211ENST00000542555 RGS9O75916 674 aaPredicted RBP9.78□□□□□ -0.84
CLPB-211ENST00000542555 UBTFL1P0CB47 393 aaPredicted RBP9.78□□□□□ -0.84
CLPB-211ENST00000542555 NCOA4Q13772 614 aa9.78□□□□□ -0.84
CLPB-211ENST00000542555 CCL14Q16627 93 aa9.78□□□□□ -0.84
CLPB-211ENST00000542555 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
CLPB-211ENST00000542555 FMR1NBQ8N0W7 255 aaPredicted RBP9.78□□□□□ -0.84
CLPB-211ENST00000542555 FEZ1Q99689 392 aa9.78□□□□□ -0.84
CLPB-211ENST00000542555 SLC5A4Q9NY91 659 aa9.78□□□□□ -0.84
CLPB-211ENST00000542555 RAI14Q9P0K7 980 aa9.78□□□□□ -0.84
CLPB-211ENST00000542555 PDS5AQ29RF7 1337 aaKnown RBP9.78□□□□□ -0.84
CLPB-211ENST00000542555 SLC15A5A6NIM6 579 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 HLA-DOAP06340 250 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 AFF1P51825 1210 aaKnown RBP9.77□□□□□ -0.85
CLPB-211ENST00000542555 MECOMQ03112 1051 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 TYRO3Q06418 890 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 PSAPL1Q6NUJ1 521 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 SLC39A5Q6ZMH5 540 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 DPP9Q86TI2 863 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 FOXP4Q8IVH2 680 aaPredicted RBP9.77□□□□□ -0.85
CLPB-211ENST00000542555 BADQ92934 168 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 SUSD3Q96L08 255 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.85
CLPB-211ENST00000542555 PNMA5Q96PV4 448 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 PHACTR1Q9C0D0 580 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 LRP2BPQ9P2M1 347 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 RBPJLQ9UBG7 517 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 RNF112Q9ULX5 631 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
CLPB-211ENST00000542555 RANBP2P49792 3224 aaKnown RBP9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP14P54578 494 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 RHBDL3P58872 404 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 GJC2Q5T442 439 aaPredicted RBP9.76□□□□□ -0.85
CLPB-211ENST00000542555 MCTP1Q6DN14 999 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 CCDC174Q6PII3 467 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 ATG9AQ7Z3C6 839 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP6NLQ92738 828 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 NEUROD6Q96NK8 337 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 USP44Q9H0E7 712 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 PORCNQ9H237 461 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 TXNRD2Q9NNW7 524 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 TACC3Q9Y6A5 838 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 COL2A1P02458 1487 aaPredicted RBP9.76□□□□□ -0.85
CLPB-211ENST00000542555 PTPRFP10586 1907 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 MYH2Q9UKX2 1941 aa9.76□□□□□ -0.85
CLPB-211ENST00000542555 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
CLPB-211ENST00000542555 DOCK3Q8IZD9 2030 aa9.75□□□□□ -0.85
CLPB-211ENST00000542555 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.75□□□□□ -0.85
CLPB-211ENST00000542555 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.75□□□□□ -0.85
CLPB-211ENST00000542555 RAG1P15918 1043 aa9.75□□□□□ -0.85
CLPB-211ENST00000542555 RFX5P48382 616 aaPredicted RBP9.75□□□□□ -0.85
CLPB-211ENST00000542555 RASGRF1Q13972 1273 aa9.75□□□□□ -0.85
CLPB-211ENST00000542555 C9orf50Q5SZB4 431 aa9.75□□□□□ -0.85
CLPB-211ENST00000542555 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms