RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 PIBF1Q8WXW3 757 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 AGXT2Q9BYV1 514 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 WDR11Q9BZH6 1224 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 PRO3102Q9H379 93 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 PXMP2Q9NR77 195 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 KIAA1217Q5T5P2 1943 aa17.88■□□□□ 0.45
ECHDC2-223ENST00000542552 KLF18A0A0U1RQI7 1052 aa17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 PTGS1P23219 599 aa17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 PSMA5P28066 241 aa17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 RTP1P59025 263 aa17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 GNASQ5JWF2 1037 aa17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 Q6ZUG5 572 aa17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 PCSK9Q8NBP7 692 aaKnown RBP17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 FAM217BQ9NTX9 383 aaPredicted RBP17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 RBM28Q9NW13 759 aaKnown RBP17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 COLQQ9Y215 455 aaPredicted RBP17.87■□□□□ 0.45
ECHDC2-223ENST00000542552 GCOM1H8Y6P7 765 aaPredicted RBP17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 DYNC1LI2O43237 492 aaPredicted RBP17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 ASGR1P07306 291 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 POLR2MP0CAP2 368 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 HOXA13P31271 388 aaPredicted RBP17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 STXBP2Q15833 593 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 ARHGEF16Q5VV41 709 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 SCFD2Q8WU76 684 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 TM6SF1Q9BZW5 370 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 AP5M1Q9H0R1 490 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 SEC63Q9UGP8 760 aaKnown RBP17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 ZMYND8Q9ULU4 1186 aaPredicted RBP17.86■□□□□ 0.45
ECHDC2-223ENST00000542552 ELP1O95163 1332 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 NR3C2P08235 984 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 EIF2AK2P19525 551 aaKnown RBP17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 CASTP20810 708 aaKnown RBP17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 EVCP57679 992 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 BEX3Q00994 111 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 NID2Q14112 1375 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 FSCN1Q16658 493 aaKnown RBP17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 RTN1Q16799 776 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 TRIM60Q495X7 471 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 CCDC62Q6P9F0 684 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 CCDC82Q8N4S0 544 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 CNTNAP5Q8WYK1 1306 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 BRF1Q92994 677 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 PDCD2LQ9BRP1 358 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 LAMA3Q16787 3333 aa17.85■□□□□ 0.45
ECHDC2-223ENST00000542552 FRMPD4Q14CM0 1322 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 PIK3CDO00329 1044 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 NKRFO15226 690 aaKnown RBP eCLIP17.84■□□□□ 0.452e-7■■■■□ 24.9
ECHDC2-223ENST00000542552 EIF3JO75822 258 aaKnown RBP17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 SYN1P17600 705 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 CDC27P30260 824 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 PPP2R5BQ15173 497 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 CHRDL2Q6WN34 429 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 RUFY3Q7L099 469 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 VSIG10LQ86VR7 867 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 GDF15Q99988 308 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 STARD7Q9NQZ5 370 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 ATP11BQ9Y2G3 1177 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 TRIOBPQ9H2D6 2365 aa17.84■□□□□ 0.45
ECHDC2-223ENST00000542552 hCG_1642624A0A1W2PR95 340 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 MEIS2O14770 477 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 ARIH2O95376 493 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 CDK7P50613 346 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 FGD1P98174 961 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 TLE2Q04725 743 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 TTLL4Q14679 1199 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 PGM5Q15124 567 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 HABP4Q5JVS0 413 aaKnown RBP17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 ANKRD33Q7Z3H0 272 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 GLT1D1Q96MS3 346 aa17.83■□□□□ 0.44
ECHDC2-223ENST00000542552 CABYRO75952 493 aa17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 RGS20O76081 388 aa17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 TXNP10599 105 aaKnown RBP17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 ADD1P35611 737 aaKnown RBP17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 FCHSD1Q86WN1 690 aa17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 IL31RAQ8NI17 732 aa17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 TOX2Q96NM4 488 aa17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 CYP46A1Q9Y6A2 500 aa17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 LTBP2Q14767 1821 aa17.82■□□□□ 0.44
ECHDC2-223ENST00000542552 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 A6NJR5 290 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 ZEB2O60315 1214 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 BMP8BP34820 402 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 USP17L6PQ6QN14 398 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 CXCL17Q6UXB2 119 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 SEPT14Q6ZU15 432 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 SLC43A3Q8NBI5 491 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 OR6J1Q8NGC5 347 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 COPS5Q92905 334 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 IL17RAQ96F46 866 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 PSTPIP2Q9H939 334 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 PDLIM7Q9NR12 457 aa17.81■□□□□ 0.44
ECHDC2-223ENST00000542552 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms