RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 MARCH6O60337 910 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 CAVIN2O95810 425 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 POLR2MP0CAP2 368 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 ARHGAP4P98171 946 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 DPCR1Q3MIW9 517 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 UBE2Q2Q8WVN8 375 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
SCG3-202ENST00000542355 CDCA5Q96FF9 252 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 PAGE5Q96GU1 130 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 NAP1L4Q99733 375 aaKnown RBP12.45□□□□□ -0.42
SCG3-202ENST00000542355 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 CTDP1Q9Y5B0 961 aaPredicted RBP12.45□□□□□ -0.42
SCG3-202ENST00000542355 CSADQ9Y600 493 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 SNCAIPQ9Y6H5 919 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 ABCB11O95342 1321 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 GCFC2P16383 781 aaKnown RBP12.45□□□□□ -0.42
SCG3-202ENST00000542355 IREB2P48200 963 aaKnown RBP12.45□□□□□ -0.42
SCG3-202ENST00000542355 NLRP12P59046 1061 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
SCG3-202ENST00000542355 MOB2Q70IA6 237 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 STAMQ92783 540 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 GJA10Q969M2 543 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 AK8Q96MA6 479 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 UIMC1Q96RL1 719 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 PLIN2Q99541 437 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
SCG3-202ENST00000542355 TMOD4Q9NZQ9 345 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
SCG3-202ENST00000542355 ZBED4O75132 1171 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 ALAS1P13196 640 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 NF2P35240 595 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 CABP7Q86V35 215 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 CRYGNQ8WXF5 182 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 HAS1Q92839 578 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 CCSER1Q9C0I3 900 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 TTC12Q9H892 705 aaPredicted RBP12.44□□□□□ -0.42
SCG3-202ENST00000542355 DISC1Q9NRI5 854 aa12.44□□□□□ -0.42
SCG3-202ENST00000542355 ATAD5Q96QE3 1844 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 CYP3A7-CYP3A51PA0A087WV96 503 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 VWA5AO00534 786 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 CYP3A7P24462 503 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 CASP1P29466 404 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 SREBF1P36956 1147 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 STAT6P42226 847 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 CCDC173Q0VFZ6 552 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 TMEM266Q2M3C6 531 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 RRAGBQ5VZM2 374 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
SCG3-202ENST00000542355 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 SMARCE1Q969G3 411 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 WNK4Q96J92 1243 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 NAT10Q9H0A0 1025 aaKnown RBP12.43□□□□□ -0.42
SCG3-202ENST00000542355 HOMER2Q9NSB8 354 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 CCDC39Q9UFE4 941 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 ZNF76P36508 570 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 SARSP49591 514 aaKnown RBP12.43□□□□□ -0.42
SCG3-202ENST00000542355 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
SCG3-202ENST00000542355 COG2Q14746 738 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 IQCB1Q15051 598 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 PRR16Q569H4 304 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
SCG3-202ENST00000542355 ELP3Q9H9T3 547 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 LRWD1Q9UFC0 647 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 PCDHA12Q9UN75 941 aa12.43□□□□□ -0.42
SCG3-202ENST00000542355 BECN2A8MW95 431 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 FAM86B1E9PN63 330 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 NFIBO00712 420 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 FAM86B2P0C5J1 330 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 PDIA5Q14554 519 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 SMYD5Q6GMV2 418 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 MOXD1Q6UVY6 613 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 CATSPERGQ6ZRH7 1159 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 TEX2Q8IWB9 1127 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 CLEC4DQ8WXI8 215 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 CLMNQ96JQ2 1002 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 MTRQ99707 1265 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 RAB34Q9BZG1 259 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 MAN1B1Q9UKM7 699 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 POLR2AP24928 1970 aaKnown RBP12.42□□□□□ -0.42
SCG3-202ENST00000542355 POTEMA6NI47 508 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 GOLGA6L19H0YKK7 550 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 SMC2O95347 1197 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 FDX1P10109 184 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 UBXN2AP68543 259 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 NAALADL2Q58DX5 795 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 SH3D19Q5HYK7 790 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 NT5DC1Q5TFE4 455 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 DHX40Q8IX18 779 aaKnown RBP12.42□□□□□ -0.42
SCG3-202ENST00000542355 ANKRD13AQ8IZ07 590 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 CYP2W1Q8TAV3 490 aa12.42□□□□□ -0.42
SCG3-202ENST00000542355 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms