RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ZSCAN10Q96SZ4 725 aaPredicted RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 CRACR2AQ9BSW2 395 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 SAR1BQ9Y6B6 198 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 ARAP2Q8WZ64 1704 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 CDK8P49336 464 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 SLC7A5Q01650 507 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 CT47A1Q5JQC4 288 aaPredicted RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 CCDC122Q5T0U0 273 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 RRAGBQ5VZM2 374 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 CCNI2Q6ZMN8 369 aaPredicted RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 SND1Q7KZF4 910 aaKnown RBP eCLIP10.19□□□□□ -0.78
THBS3-211ENST00000541990 ZNF654Q8IZM8 581 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 SH2D3CQ8N5H7 860 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 TSEN2Q8NCE0 465 aaKnown RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 CCDC51Q96ER9 411 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 PSMB7Q99436 277 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 VAT1LQ9HCJ6 419 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 DMGDHQ9UI17 866 aaKnown RBP10.19□□□□□ -0.78
THBS3-211ENST00000541990 ADAMTSL1Q8N6G6 1762 aa10.19□□□□□ -0.78
THBS3-211ENST00000541990 STK36Q9NRP7 1315 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 MYH2Q9UKX2 1941 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 ERICH2A1L162 156 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 KCNJ18B7U540 433 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 PES1O00541 588 aaKnown RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 NKRFO15226 690 aaKnown RBP eCLIP10.18□□□□□ -0.78
THBS3-211ENST00000541990 GDF11O95390 407 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 PMS1P54277 932 aaKnown RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 UBXN1Q04323 297 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 PDCLQ13371 301 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 KCNJ12Q14500 433 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 ZNF174Q15697 407 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 RTN1Q16799 776 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 NBPF9Q3BBW0 867 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 SAMD7Q7Z3H4 446 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 PODNQ7Z5L7 613 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 LRRC47Q8N1G4 583 aaKnown RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 CAGE1Q8TC20 777 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 TEKT1Q969V4 418 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 TMEM87BQ96K49 555 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 MACROD2A1Z1Q3 448 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 GOLGA6BA6NDN3 693 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 TSPY3P0CV98 308 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 TSPY8P0CW00 308 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 TAL1P17542 331 aaPredicted RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 MNAT1P51948 309 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 CYP27A1Q02318 531 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 CXCL9Q07325 125 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 SEC23AQ15436 765 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 TTMPQ5BVD1 217 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 SH3BP5LQ7L8J4 393 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 IRF2BP1Q8IU81 584 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 SECISBP2LQ93073 1101 aaKnown RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 CTAGE1Q96RT6 745 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 KRT23Q9C075 422 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 FOXP1Q9H334 677 aaPredicted RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 ATP8A2Q9NTI2 1148 aa10.18□□□□□ -0.78
THBS3-211ENST00000541990 LIMA1Q9UHB6 759 aaKnown RBP10.18□□□□□ -0.78
THBS3-211ENST00000541990 LDHCP07864 332 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 AKR1B1P15121 316 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 RASA1P20936 1047 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 MATR3P43243 847 aaKnown RBP eCLIP10.17□□□□□ -0.78
THBS3-211ENST00000541990 JAG1P78504 1218 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 KCTD19Q17RG1 926 aaPredicted RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 TCP11X2Q5H9J9 407 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 PAPD7Q5XG87 772 aaKnown RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 RCSD1Q6JBY9 416 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 NELFBQ8WX92 580 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 CAPS2Q9BXY5 557 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 MYO1AQ9UBC5 1043 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 EBAG9O00559 213 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 EIF3HO15372 352 aaKnown RBP eCLIP10.17□□□□□ -0.78
THBS3-211ENST00000541990 ATP1A2P50993 1020 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 GSTO1P78417 241 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 KCTD16Q68DU8 428 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 KANK3Q6NY19 840 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 ZNF444Q8N0Y2 327 aaPredicted RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 CRACR2BQ8N4Y2 399 aaPredicted RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 AENQ8WTP8 325 aaKnown RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 TBC1D22AQ8WUA7 517 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 SGIP1Q9BQI5 828 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 UBA5Q9GZZ9 404 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 AGPAT5Q9NUQ2 364 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.17□□□□□ -0.78
THBS3-211ENST00000541990 FRMPD2Q68DX3 1309 aaPredicted RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 SWT1Q5T5J6 900 aaKnown RBP10.17□□□□□ -0.78
THBS3-211ENST00000541990 USP17L2Q6R6M4 530 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 ARHGAP27Q6ZUM4 889 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 TMC4Q7Z404 712 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 LRRC1Q9BTT6 524 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 CXorf56Q9H5V9 222 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 DNAJC18Q9H819 358 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 FAM198AQ9UFP1 575 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 CAPN7Q9Y6W3 813 aa10.17□□□□□ -0.78
THBS3-211ENST00000541990 C10orf71Q711Q0 1435 aa10.16□□□□□ -0.78
THBS3-211ENST00000541990 TRIM75PA6NK02 468 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms