RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SSPNQ14714 243 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 MRM1Q6IN84 353 aaKnown RBP5.99□□□□□ -1.45
SNHG1-217ENST00000541578 SPOCD1Q6ZMY3 1216 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 EEPD1Q7L9B9 569 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 USP33Q8TEY7 942 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 CCDC140Q96MF4 163 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 SRPK1Q96SB4 655 aaKnown RBP5.99□□□□□ -1.45
SNHG1-217ENST00000541578 MMP19Q99542 508 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 PIF1Q9H611 641 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 GULP1Q9UBP9 304 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.99□□□□□ -1.45
SNHG1-217ENST00000541578 RWDD3Q9Y3V2 267 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 ZC3H12DA2A288 527 aaKnown RBP5.98□□□□□ -1.45
SNHG1-217ENST00000541578 THBDP07204 575 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 GLI4P10075 376 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 PI3P19957 117 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 IBSPP21815 317 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-217ENST00000541578 PRR5P85299 388 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 TARBP2Q15633 366 aaKnown RBP5.98□□□□□ -1.45
SNHG1-217ENST00000541578 FBLN7Q53RD9 439 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 IQCEQ6IPM2 695 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 ZNF227Q86WZ6 799 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 TMEM151BQ8IW70 566 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 BTN2A2Q8WVV5 523 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 HNRNPLLQ8WVV9 542 aaKnown RBP5.98□□□□□ -1.45
SNHG1-217ENST00000541578 MTA3Q9BTC8 594 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 EPN3Q9H201 632 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 ST7Q9NRC1 585 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 SIRPGQ9P1W8 387 aa5.98□□□□□ -1.45
SNHG1-217ENST00000541578 AGRPO00253 132 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 IRS4O14654 1257 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-217ENST00000541578 TBX1O43435 398 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 SNRPB2P08579 225 aaKnown RBP5.97□□□□□ -1.45
SNHG1-217ENST00000541578 ECI1P42126 302 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 NCKAP1LP55160 1127 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 ZNF200P98182 395 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-217ENST00000541578 RNF187Q5TA31 235 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-217ENST00000541578 IGDCC3Q8IVU1 814 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 PANK1Q8TE04 598 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 FRS2Q8WU20 508 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.97□□□□□ -1.453e-11■□□□□ 8.9
SNHG1-217ENST00000541578 PCDHA5Q9Y5H7 936 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 HCFC2Q9Y5Z7 792 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 IRS2Q9Y4H2 1338 aa5.97□□□□□ -1.45
SNHG1-217ENST00000541578 CECR2Q9BXF3 1484 aa5.96□□□□□ -1.45
SNHG1-217ENST00000541578 MYO15BQ96JP2 1530 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 CCDC85CA6NKD9 419 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 KLF4O43474 513 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 CPP00450 1065 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 FUCA1P04066 466 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 PFKLP17858 780 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 KCNJ6P48051 423 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 TCERG1LQ5VWI1 586 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 MBLAC2Q68D91 279 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 CELF2-AS1Q8N7Q2 184 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 NPLOC4Q8TAT6 608 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 PEX11GQ96HA9 241 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 NUDT5Q9UKK9 219 aa5.96□□□□□ -1.46
SNHG1-217ENST00000541578 BUB1BO60566 1050 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-217ENST00000541578 SCG5P05408 212 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 CYP4F3Q08477 520 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 DDR2Q16832 855 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 INF2Q27J81 1249 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 SLC10A6Q3KNW5 377 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-217ENST00000541578 CNKSR3Q6P9H4 555 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 TMEFF1Q8IYR6 380 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 NETO2Q8NC67 525 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 DPF3Q92784 378 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 MKL1Q969V6 931 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 DACT3Q96B18 629 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-217ENST00000541578 SLKQ9H2G2 1235 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-217ENST00000541578 RXFP1Q9HBX9 757 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 EPB41L4AQ9HCS5 686 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-217ENST00000541578 BTG4Q9NY30 223 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 TBX22Q9Y458 520 aa5.95□□□□□ -1.46
SNHG1-217ENST00000541578 MEFVO15553 781 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-217ENST00000541578 AFF3P51826 1226 aaKnown RBP5.94□□□□□ -1.46
SNHG1-217ENST00000541578 SLC9A5Q14940 896 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 SF1Q15637 639 aaKnown RBP5.94□□□□□ -1.46
SNHG1-217ENST00000541578 TAF7LQ5H9L4 462 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 WWC2Q6AWC2 1192 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 FAM129CQ86XR2 697 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 KREMEN2Q8NCW0 462 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 PLEKHO2Q8TD55 490 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 DIO2Q92813 273 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 TSPAN17Q96FV3 270 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 MARCH2Q9P0N8 246 aa5.94□□□□□ -1.46
SNHG1-217ENST00000541578 TIMM13Q9Y5L4 95 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-217ENST00000541578 MRPL42Q9Y6G3 142 aaKnown RBP5.94□□□□□ -1.46
SNHG1-217ENST00000541578 SBNO2Q9Y2G9 1366 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 CC2D2AQ9P2K1 1620 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 C22orf46C9J442 243 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 ZBTB7AO95365 584 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 NTRK1P04629 796 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 NCAM1P13591 858 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 FBLN1P23142 703 aa5.93□□□□□ -1.46
SNHG1-217ENST00000541578 IGFBP6P24592 240 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-217ENST00000541578 HSD3B2P26439 372 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms