RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 MB21D2Q8IYB1 491 aaPredicted RBP6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TRPM4Q8TD43 1214 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 GLMNQ92990 594 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 SNX21Q969T3 373 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 ZSCAN31Q96LW9 406 aaPredicted RBP6.72□□□□□ -1.33
CDKN3-206ENST00000541304 ZNF341Q9BYN7 854 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 AGXT2Q9BYV1 514 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 SH2B1Q9NRF2 756 aaPredicted RBP6.72□□□□□ -1.33
CDKN3-206ENST00000541304 TOMM22Q9NS69 142 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 PALD1Q9ULE6 856 aa6.72□□□□□ -1.33
CDKN3-206ENST00000541304 CDK5RAP2Q96SN8 1893 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 CCDC196A0A1B0GTZ2 297 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 DHX16O60231 1041 aaKnown RBP6.71□□□□□ -1.34
CDKN3-206ENST00000541304 CTNND1O60716 968 aaKnown RBP6.71□□□□□ -1.34
CDKN3-206ENST00000541304 IREB2P48200 963 aaKnown RBP6.71□□□□□ -1.34
CDKN3-206ENST00000541304 CDK8P49336 464 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 NEK4P51957 841 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 HAND2P61296 217 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 TCP10Q12799 353 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 NOL9Q5SY16 702 aaKnown RBP6.71□□□□□ -1.34
CDKN3-206ENST00000541304 C1orf53Q5VUE5 145 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 SYNE3Q6ZMZ3 975 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 USP48Q86UV5 1035 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 SGMS1Q86VZ5 419 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 HSCBQ8IWL3 235 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 TEPSINQ96N21 525 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 MAP3K14Q99558 947 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 KANSL2Q9H9L4 492 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.71□□□□□ -1.34
CDKN3-206ENST00000541304 PDRG1Q9NUG6 133 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 SAP30BPQ9UHR5 308 aaKnown RBP6.71□□□□□ -1.34
CDKN3-206ENST00000541304 ANGEL1Q9UNK9 670 aaKnown RBP6.71□□□□□ -1.34
CDKN3-206ENST00000541304 NEDD4P46934 1319 aa6.71□□□□□ -1.34
CDKN3-206ENST00000541304 NID2Q14112 1375 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ELOA3CA0A087WX78 387 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 DDTLA6NHG4 134 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ELOA3DA6NLF2 546 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 B4E1Z4 1266 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 PRC1O43663 620 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 RANBP6O60518 1105 aaKnown RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ADAM23O75077 832 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 DDAH1O94760 285 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 TTLL1O95922 423 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 EGFRP00533 1210 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 RASA1P20936 1047 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 SHMT1P34896 483 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 NOVP48745 357 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 PLCD1P51178 756 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 CACNB3P54284 484 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 EVCP57679 992 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 EXOSC10Q01780 885 aaKnown RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 WTAPQ15007 396 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ABCB5Q2M3G0 1257 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 CERKLQ49MI3 558 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 EAPPQ56P03 285 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ARMC9Q7Z3E5 817 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 SYT9Q86SS6 491 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 TSEN2Q8NCE0 465 aaKnown RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ANKS1AQ92625 1134 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ZNF274Q96GC6 653 aaPredicted RBP6.7□□□□□ -1.34
CDKN3-206ENST00000541304 KIF2CQ99661 725 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 PHACTR1Q9C0D0 580 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 TMEM39BQ9GZU3 492 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 AS3MTQ9HBK9 375 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 NYAP2Q9P242 653 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 ZNF112Q9UJU3 913 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 KIF3AQ9Y496 699 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 TNKSO95271 1327 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 MYH1P12882 1939 aa6.7□□□□□ -1.34
CDKN3-206ENST00000541304 PAPPA2Q9BXP8 1791 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 SHTN1A0MZ66 631 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 CCDC69A6NI79 296 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 SH2B2O14492 632 aaPredicted RBP6.69□□□□□ -1.34
CDKN3-206ENST00000541304 IFIT3O14879 490 aaKnown RBP6.69□□□□□ -1.34
CDKN3-206ENST00000541304 SIN3BO75182 1162 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 CDKL5O76039 1030 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 ALAS2P22557 587 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 KIF5BP33176 963 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 CAP2P40123 477 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 GNAQP50148 359 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 USP14P54578 494 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 TFAP4Q01664 338 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 FSTL1Q12841 308 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 TMEM132AQ24JP5 1023 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 ADCK5Q3MIX3 580 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 TMEM67Q5HYA8 995 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 RRP12Q5JTH9 1297 aaKnown RBP6.69□□□□□ -1.34
CDKN3-206ENST00000541304 IFIT1BQ5T764 474 aaKnown RBP6.69□□□□□ -1.34
CDKN3-206ENST00000541304 CPLX2Q6PUV4 134 aaKnown RBP6.69□□□□□ -1.34
CDKN3-206ENST00000541304 STOX1Q6ZVD7 989 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 CATIPQ7Z7H3 387 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 ANKRD13AQ8IZ07 590 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 SCYL3Q8IZE3 742 aa6.69□□□□□ -1.34
CDKN3-206ENST00000541304 FAM177A1Q8N128 213 aaPredicted RBP6.69□□□□□ -1.34
CDKN3-206ENST00000541304 SMC1BQ8NDV3 1235 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms