RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 EPS15L1Q9UBC2 864 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 GMNCA6NCL1 334 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 CD19P15391 556 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 DEUP1Q05D60 604 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 TCIRG1Q13488 830 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 PAGE5Q96GU1 130 aa16.28■□□□□ 0.2
SMARCA4-207ENST00000541122 H0YCG3 227 aa16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 CEBPAP49715 358 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 CDKL2Q92772 493 aa16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 POC1B-GALNT4F8VUJ3 575 aa16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 CYP2E1P05181 493 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 CMTR1Q8N1G2 835 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 PCDHA4Q9UN74 947 aa16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 ASXL2Q76L83 1435 aa16.27■□□□□ 0.2
SMARCA4-207ENST00000541122 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 FTCDO95954 541 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 USP14P54578 494 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 DR1Q01658 176 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 POLA2Q14181 598 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 PARP9Q8IXQ6 854 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 IL17REQ8NFR9 667 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 FAM81BQ96LP2 452 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 ANAPC5Q9UJX4 755 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 ATP7AQ04656 1500 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 PTPROQ16827 1216 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 CCDC125Q86Z20 511 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 PI4K2BQ8TCG2 481 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 ABHD10Q9NUJ1 306 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 PKD2L1Q9P0L9 805 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 STOML1Q9UBI4 398 aa16.27■□□□□ 0.19
SMARCA4-207ENST00000541122 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 USP17L21D6R901 530 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 CXCR5P32302 372 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 TBX22Q9Y458 520 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 KRT3P12035 628 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 RPS6KA2Q15349 733 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 ARHGAP18Q8N392 663 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 CALR3Q96L12 384 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 STAM2O75886 525 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 MMEP08473 750 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 P4HA1P13674 534 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 POLR2BP30876 1174 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 NSFP46459 744 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 MFAP3P55082 362 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 NME8Q8N427 588 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 ARMC2Q8NEN0 867 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 ZNF496Q96IT1 587 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 ZDHHC9Q9Y397 364 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 MYO1FO00160 1098 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 MYL7Q01449 175 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 SGO2Q562F6 1265 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 ARL6IP4Q66PJ3 421 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 NLRP14Q86W24 1093 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 EFHD1Q9BUP0 239 aa16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 DDX25Q9UHL0 483 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-207ENST00000541122 GRID2IPA4D2P6 1211 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 PODXLO00592 558 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 GAP43P17677 238 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 CTSWP56202 376 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 SLC7A5Q01650 507 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 MESDQ14696 234 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 TMED2Q15363 201 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 TPH2Q8IWU9 490 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 COG1Q8WTW3 980 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 SDCCAG3Q96C92 435 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 LRGUKQ96M69 825 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 SPECC1L-ADORA2AF8WAN1 911 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 GAS7O60861 476 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 PRR16Q569H4 304 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 MUM1L1Q5H9M0 696 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 ALDH8A1Q9H2A2 487 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 BATF3Q9NR55 127 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 USP27XA6NNY8 438 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 TTC4O95801 387 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 TNNI1P19237 187 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 ASPHQ12797 758 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 GRAMD1CQ8IYS0 662 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 PTPN22Q9Y2R2 807 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 NR2F2P24468 414 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 LIFRP42702 1097 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 RCN2Q14257 317 aa16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-207ENST00000541122 ADGRG1Q9Y653 693 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms