RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 NID2Q14112 1375 aa19.53■□□□□ 0.72
CD9-209ENST00000540891 GCOM1H8Y6P7 765 aaPredicted RBP19.52■□□□□ 0.72
CD9-209ENST00000540891 EVI5O60447 810 aa19.52■□□□□ 0.72
CD9-209ENST00000540891 POLR2MP0CAP2 368 aa19.52■□□□□ 0.72
CD9-209ENST00000540891 EIF2AK2P19525 551 aaKnown RBP19.52■□□□□ 0.72
CD9-209ENST00000540891 CST5P28325 142 aaPredicted RBP19.52■□□□□ 0.72
CD9-209ENST00000540891 EVCP57679 992 aa19.52■□□□□ 0.72
CD9-209ENST00000540891 FERMT2Q96AC1 680 aa19.52■□□□□ 0.72
CD9-209ENST00000540891 PXMP2Q9NR77 195 aa19.52■□□□□ 0.72
CD9-209ENST00000540891 C6orf222P0C671 652 aaPredicted RBP19.51■□□□□ 0.71
CD9-209ENST00000540891 ADD1P35611 737 aaKnown RBP19.51■□□□□ 0.71
CD9-209ENST00000540891 METAP2P50579 478 aaKnown RBP eCLIP19.51■□□□□ 0.71
CD9-209ENST00000540891 ATN1P54259 1190 aaPredicted RBP19.51■□□□□ 0.71
CD9-209ENST00000540891 ARHGEF16Q5VV41 709 aa19.51■□□□□ 0.71
CD9-209ENST00000540891 TLK2Q86UE8 772 aa19.51■□□□□ 0.71
CD9-209ENST00000540891 IWS1Q96ST2 819 aa19.51■□□□□ 0.71
CD9-209ENST00000540891 MPHOSPH6Q99547 160 aaKnown RBP19.51■□□□□ 0.71
CD9-209ENST00000540891 TSEN34Q9BSV6 310 aaKnown RBP19.51■□□□□ 0.71
CD9-209ENST00000540891 WDR11Q9BZH6 1224 aa19.51■□□□□ 0.71
CD9-209ENST00000540891 NAP1L2Q9ULW6 460 aaPredicted RBP19.51■□□□□ 0.71
CD9-209ENST00000540891 CYP46A1Q9Y6A2 500 aa19.51■□□□□ 0.71
CD9-209ENST00000540891 B4DLN1 442 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 NR3C2P08235 984 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 MRPL12P52815 198 aaKnown RBP19.5■□□□□ 0.71
CD9-209ENST00000540891 ACLYP53396 1101 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 SNX17Q15036 470 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 KCNA10Q16322 511 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 DUSP28Q4G0W2 176 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 SLC39A5Q6ZMH5 540 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 NOL8Q76FK4 1167 aaKnown RBP19.5■□□□□ 0.71
CD9-209ENST00000540891 C7orf61Q8IZ16 206 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 IL31RAQ8NI17 732 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 GPKOWQ92917 476 aaPredicted RBP eCLIP19.5■□□□□ 0.71
CD9-209ENST00000540891 IL17RAQ96F46 866 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 PDCD2LQ9BRP1 358 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 Q9Y3F1 56 aa19.5■□□□□ 0.71
CD9-209ENST00000540891 A0A1W2PQ45 241 aaPredicted RBP19.49■□□□□ 0.71
CD9-209ENST00000540891 A0A1W2PQY0 241 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 MEIS2O14770 477 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 DYNC1LI2O43237 492 aaPredicted RBP19.49■□□□□ 0.71
CD9-209ENST00000540891 ARIH2O95376 493 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
CD9-209ENST00000540891 ANAPC15P60006 121 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 BEX3Q00994 111 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 PGM5Q15124 567 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 WWC2Q6AWC2 1192 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 TYW1BQ6NUM6 668 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 USP17L6PQ6QN14 398 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 FCHSD1Q86WN1 690 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 NR2E3Q9Y5X4 410 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
CD9-209ENST00000540891 FRMPD4Q14CM0 1322 aa19.49■□□□□ 0.71
CD9-209ENST00000540891 MOXD2PA6NHM9 499 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 PIK3CDO00329 1044 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 STXBP2Q15833 593 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 GNASQ5JWF2 1037 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 CCDC62Q6P9F0 684 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 SCFD2Q8WU76 684 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 COPS5Q92905 334 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 LARP6Q9BRS8 491 aaKnown RBP19.48■□□□□ 0.71
CD9-209ENST00000540891 SPC25Q9HBM1 224 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 PCDH10Q9P2E7 1040 aa19.48■□□□□ 0.71
CD9-209ENST00000540891 CCDC196A0A1B0GTZ2 297 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 EIF3JO75822 258 aaKnown RBP19.47■□□□□ 0.71
CD9-209ENST00000540891 RGS20O76081 388 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 ASGR1P07306 291 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 RTP1P59025 263 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 NTRK3Q16288 839 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 C1orf53Q5VUE5 145 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 HEATR3Q7Z4Q2 680 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 VSIG10LQ86VR7 867 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 PCSK9Q8NBP7 692 aaKnown RBP19.47■□□□□ 0.71
CD9-209ENST00000540891 PDRG1Q9NUG6 133 aa19.47■□□□□ 0.71
CD9-209ENST00000540891 FSCN1Q16658 493 aaKnown RBP19.46■□□□□ 0.71
CD9-209ENST00000540891 TRIM60Q495X7 471 aa19.46■□□□□ 0.71
CD9-209ENST00000540891 SEPT14Q6ZU15 432 aa19.46■□□□□ 0.71
CD9-209ENST00000540891 ZFP91Q96JP5 570 aaPredicted RBP19.46■□□□□ 0.71
CD9-209ENST00000540891 AP5M1Q9H0R1 490 aa19.46■□□□□ 0.71
CD9-209ENST00000540891 PSTPIP2Q9H939 334 aa19.46■□□□□ 0.71
CD9-209ENST00000540891 NCOA5Q9HCD5 579 aaKnown RBP19.46■□□□□ 0.71
CD9-209ENST00000540891 ZMYND8Q9ULU4 1186 aaPredicted RBP19.46■□□□□ 0.71
CD9-209ENST00000540891 DNAH12Q6ZR08 3092 aa19.45■□□□□ 0.7
CD9-209ENST00000540891 STXBP3O00186 592 aa19.45■□□□□ 0.7
CD9-209ENST00000540891 NKRFO15226 690 aaKnown RBP eCLIP19.45■□□□□ 0.7
CD9-209ENST00000540891 TXNP10599 105 aaKnown RBP19.45■□□□□ 0.7
CD9-209ENST00000540891 MYCLP12524 364 aaPredicted RBP19.45■□□□□ 0.7
CD9-209ENST00000540891 CCT2P78371 535 aaKnown RBP19.45■□□□□ 0.7
CD9-209ENST00000540891 TTLL4Q14679 1199 aa19.45■□□□□ 0.7
CD9-209ENST00000540891 SMARCC2Q8TAQ2 1214 aa19.45■□□□□ 0.7
CD9-209ENST00000540891 STARD7Q9NQZ5 370 aa19.45■□□□□ 0.7
CD9-209ENST00000540891 EIF5BO60841 1220 aaKnown RBP19.44■□□□□ 0.7
CD9-209ENST00000540891 SYN1P17600 705 aa19.44■□□□□ 0.7
CD9-209ENST00000540891 MRPS9P82933 396 aaKnown RBP19.44■□□□□ 0.7
CD9-209ENST00000540891 PKN1Q16512 942 aa19.44■□□□□ 0.7
CD9-209ENST00000540891 UBE2SQ16763 222 aa19.44■□□□□ 0.7
CD9-209ENST00000540891 PFKFB3Q16875 520 aaPredicted RBP19.44■□□□□ 0.7
CD9-209ENST00000540891 LY6KQ17RY6 165 aa19.44■□□□□ 0.7
CD9-209ENST00000540891 CXCL17Q6UXB2 119 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms