RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 FBXO46Q6PJ61 603 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 RBM43Q6ZSC3 357 aaKnown RBP16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 OPTNQ96CV9 577 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 MS4A4AQ96JQ5 239 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 CSRNP2Q9H175 543 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 TNMDQ9H2S6 317 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 ADAMTS5Q9UNA0 930 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 KCNH4Q9UQ05 1017 aa16.17■□□□□ 0.18
CYB561A3-216ENST00000540755 A0A0G2JMZ2 1700 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 VWA5AO00534 786 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 CTAGE5O15320 804 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 EDIL3O43854 480 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 TAL1P17542 331 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 SYKP43405 635 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 USP11P51784 963 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 CRHR2Q13324 411 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 COG2Q14746 738 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 PPP4R3AQ6IN85 833 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 PROCA1Q8NCQ7 364 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 TIGD1Q96MW7 591 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 BRCA2P51587 3418 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 A0A0G2JLL6 359 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 FSD2A1L4K1 749 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 GOLGA6L3A6NEY3 463 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 SPDYE3A6NKU9 549 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 NEMFO60524 1076 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 ZNF202O95125 648 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 POLR2MP0CAP2 368 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 LONP1P36776 959 aaKnown RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 OAZ1P54368 228 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 CAP1Q01518 475 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 GHRHRQ02643 423 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 MOXD1Q6UVY6 613 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 PRRT2Q7Z6L0 340 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 SAMD3Q8N6K7 520 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 CRYGNQ8WXF5 182 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 BRI3BPQ8WY22 251 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 ATG4CQ96DT6 458 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 OTUD5Q96G74 571 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 AGBL1Q96MI9 1066 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 TMEM60Q9H2L4 133 aa16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-216ENST00000540755 MKI67P46013 3256 aaKnown RBP16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 VWA3AA6NCI4 1184 aa16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 IRF6O14896 467 aa16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 REPS2Q8NFH8 660 aa16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 HOXC10Q9NYD6 342 aa16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 KCNH3Q9ULD8 1083 aa16.15■□□□□ 0.18
CYB561A3-216ENST00000540755 CYP3A7-CYP3A51PA0A087WV96 503 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 ATP2A1O14983 1001 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 CYP3A7P24462 503 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 HOXA7P31268 230 aaPredicted RBP16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 SREBF1P36956 1147 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 IL17AQ16552 155 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 CAMK4Q16566 473 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 GAS2L3Q86XJ1 694 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 MCF2L2Q86YR7 1114 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 CPXCR1Q8N123 301 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 MBOAT7Q96N66 472 aa16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 P2RX7Q99572 595 aaKnown RBP16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 RAVER2Q9HCJ3 691 aaKnown RBP16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 MAP3K20Q9NYL2 800 aaKnown RBP16.14■□□□□ 0.17
CYB561A3-216ENST00000540755 SPDYE16A6NNV3 312 aaPredicted RBP16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 TDP2O95551 362 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 CFBP00751 764 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 HOXA13P31271 388 aaPredicted RBP16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 MRE11P49959 708 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 HSD17B4P51659 736 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 ARHGAP4P98171 946 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 SPECC1Q5M775 1068 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 OTOP1Q7RTM1 612 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 ELOA2Q8IYF1 753 aaPredicted RBP16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 CLEC4DQ8WXI8 215 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 SYMPKQ92797 1274 aaKnown RBP16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 MTMR9Q96QG7 549 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 FUCA2Q9BTY2 467 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 EHMT1Q9H9B1 1298 aa16.13■□□□□ 0.17
CYB561A3-216ENST00000540755 SLC37A4O43826 429 aa16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 CYP3A4P08684 503 aa16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 ALAS1P13196 640 aa16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 CALCRLQ16602 461 aa16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 TREML2Q5T2D2 321 aa16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 DDX25Q9UHL0 483 aaKnown RBP16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
CYB561A3-216ENST00000540755 KIAA0100Q14667 2235 aaKnown RBP16.11■□□□□ 0.17
CYB561A3-216ENST00000540755 CCL15-CCL14A0A0B4J2E2 113 aa16.11■□□□□ 0.17
CYB561A3-216ENST00000540755 CIITAP33076 1130 aa16.11■□□□□ 0.17
CYB561A3-216ENST00000540755 CCL15Q16663 113 aa16.11■□□□□ 0.17
CYB561A3-216ENST00000540755 TKFCQ3LXA3 575 aa16.11■□□□□ 0.17
CYB561A3-216ENST00000540755 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
CYB561A3-216ENST00000540755 GADL1Q6ZQY3 521 aa16.11■□□□□ 0.17
CYB561A3-216ENST00000540755 USP49Q70CQ1 688 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms