RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 SCFD2Q8WU76 684 aa15.46■□□□□ 0.07
CCDC130-202ENST00000540216 CUL5Q93034 780 aa15.46■□□□□ 0.07
CCDC130-202ENST00000540216 NAP1L2Q9ULW6 460 aaPredicted RBP15.46■□□□□ 0.07
CCDC130-202ENST00000540216 GNEQ9Y223 722 aaKnown RBP15.46■□□□□ 0.07
CCDC130-202ENST00000540216 DDX49Q9Y6V7 483 aaKnown RBP15.46■□□□□ 0.07
CCDC130-202ENST00000540216 ALPK3Q96L96 1907 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 MOXD2PA6NHM9 499 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 hCG_1984214I3L0E3 225 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 PIK3CDO00329 1044 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 NKRFO15226 690 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCDC130-202ENST00000540216 C6orf222P0C671 652 aaPredicted RBP15.45■□□□□ 0.06
CCDC130-202ENST00000540216 SMPD1P17405 629 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 FUT2Q10981 343 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 STXBP2Q15833 593 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 DUSP28Q4G0W2 176 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 TLK2Q86UE8 772 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 ZNF713Q8N859 430 aaPredicted RBP15.45■□□□□ 0.06
CCDC130-202ENST00000540216 KLHDC9Q8NEP7 349 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 IL17RAQ96F46 866 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 PXMP2Q9NR77 195 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 PDGFCQ9NRA1 345 aa15.45■□□□□ 0.06
CCDC130-202ENST00000540216 FAM217BQ9NTX9 383 aaPredicted RBP15.45■□□□□ 0.06
CCDC130-202ENST00000540216 RBM27Q9P2N5 1060 aaKnown RBP15.45■□□□□ 0.06
CCDC130-202ENST00000540216 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.44■□□□□ 0.06
CCDC130-202ENST00000540216 NR3C2P08235 984 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 HOXA13P31271 388 aaPredicted RBP15.44■□□□□ 0.06
CCDC130-202ENST00000540216 LRRC26Q2I0M4 334 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 CCSAPQ6IQ19 270 aaPredicted RBP15.44■□□□□ 0.06
CCDC130-202ENST00000540216 PPP1R18Q6NYC8 613 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 CCDC82Q8N4S0 544 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 PDCD2LQ9BRP1 358 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 WDR11Q9BZH6 1224 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
CCDC130-202ENST00000540216 AP5M1Q9H0R1 490 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 CEP290O15078 2479 aa15.44■□□□□ 0.06
CCDC130-202ENST00000540216 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 A0A1W2PQ45 241 aaPredicted RBP15.43■□□□□ 0.06
CCDC130-202ENST00000540216 A0A1W2PQY0 241 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 EIF3JO75822 258 aaKnown RBP15.43■□□□□ 0.06
CCDC130-202ENST00000540216 EIF2AK2P19525 551 aaKnown RBP15.43■□□□□ 0.06
CCDC130-202ENST00000540216 CDC27P30260 824 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 ACLYP53396 1101 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 TOB2Q14106 344 aaPredicted RBP15.43■□□□□ 0.06
CCDC130-202ENST00000540216 TTLL4Q14679 1199 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 SNX17Q15036 470 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 FSCN1Q16658 493 aaKnown RBP15.43■□□□□ 0.06
CCDC130-202ENST00000540216 GNASQ5JWF2 1037 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 C1orf53Q5VUE5 145 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 PSTPIP2Q9H939 334 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
CCDC130-202ENST00000540216 H0YGN5 161 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 CTAGE5O15320 804 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 ZEB2O60315 1214 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 PDIA3P30101 505 aaKnown RBP15.42■□□□□ 0.06
CCDC130-202ENST00000540216 PGM5Q15124 567 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 KCNA10Q16322 511 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 SLC39A5Q6ZMH5 540 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 FCHSD1Q86WN1 690 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 ZNF274Q96GC6 653 aaPredicted RBP15.42■□□□□ 0.06
CCDC130-202ENST00000540216 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
CCDC130-202ENST00000540216 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
CCDC130-202ENST00000540216 ELP1O95163 1332 aa15.42■□□□□ 0.06
CCDC130-202ENST00000540216 KIAA1217Q5T5P2 1943 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 MYADML2A6NDP7 307 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 MEIS2O14770 477 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 DYNC1LI2O43237 492 aaPredicted RBP15.41■□□□□ 0.06
CCDC130-202ENST00000540216 STAM2O75886 525 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 CABYRO75952 493 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 ASGR1P07306 291 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 TXNP10599 105 aaKnown RBP15.41■□□□□ 0.06
CCDC130-202ENST00000540216 CCND2P30279 289 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 ADD1P35611 737 aaKnown RBP15.41■□□□□ 0.06
CCDC130-202ENST00000540216 ATN1P54259 1190 aaPredicted RBP15.41■□□□□ 0.06
CCDC130-202ENST00000540216 C8orf34Q49A92 452 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 BRDTQ58F21 947 aaPredicted RBP15.41■□□□□ 0.06
CCDC130-202ENST00000540216 WWC2Q6AWC2 1192 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 KCNV1Q6PIU1 500 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 VSIG10LQ86VR7 867 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 C7orf61Q8IZ16 206 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 FERMT2Q96AC1 680 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 GLT1D1Q96MS3 346 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 STARD7Q9NQZ5 370 aa15.41■□□□□ 0.06
CCDC130-202ENST00000540216 IFNAR1P17181 557 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 CPT1AP50416 773 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 NAPAP54920 295 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 RTP1P59025 263 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 AKAP17AQ02040 695 aaKnown RBP15.4■□□□□ 0.06
CCDC130-202ENST00000540216 ANKRD1Q15327 319 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 PFKFB3Q16875 520 aaPredicted RBP15.4■□□□□ 0.06
CCDC130-202ENST00000540216 CCDC62Q6P9F0 684 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 USP17L6PQ6QN14 398 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 SEPT14Q6ZU15 432 aa15.4■□□□□ 0.06
CCDC130-202ENST00000540216 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.06
CCDC130-202ENST00000540216 RNF26Q9BY78 433 aaPredicted RBP15.4■□□□□ 0.06
CCDC130-202ENST00000540216 SEZ6LQ9BYH1 1024 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms