RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SKIV2LQ15477 1246 aaKnown RBP23.49■■□□□ 1.35
LPCAT3-210ENST00000540090 COPS5Q92905 334 aa23.49■■□□□ 1.35
LPCAT3-210ENST00000540090 EVI5LQ96CN4 794 aa23.49■■□□□ 1.35
LPCAT3-210ENST00000540090 CERS4Q9HA82 394 aa23.49■■□□□ 1.35
LPCAT3-210ENST00000540090 PRRC2BQ5JSZ5 2229 aaKnown RBP23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 EPOPA6NHQ4 379 aa23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 TAP1Q03518 808 aa23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 BFSP2Q13515 415 aa23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 RRP12Q5JTH9 1297 aaKnown RBP23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 HERC6Q8IVU3 1022 aa23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 PPP1R13LQ8WUF5 828 aa23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 TTC14Q96N46 770 aa23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 FTOQ9C0B1 505 aaKnown RBP eCLIP23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 WDR19Q8NEZ3 1342 aa23.48■■□□□ 1.35
LPCAT3-210ENST00000540090 TRANK1O15050 2925 aa23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 SCN10AQ9Y5Y9 1956 aa23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 KIF28PB7ZC32 967 aa23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 SNHG28P0DPA3 235 aa23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 TXNP10599 105 aaKnown RBP23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 KCNQ1P51787 676 aa23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 ZNF543Q08ER8 600 aa23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 RGS22Q8NE09 1264 aa23.47■■□□□ 1.35
LPCAT3-210ENST00000540090 B4DLN1 442 aa23.46■■□□□ 1.35
LPCAT3-210ENST00000540090 ARHGEF15O94989 841 aa23.46■■□□□ 1.35
LPCAT3-210ENST00000540090 MRPL12P52815 198 aaKnown RBP23.46■■□□□ 1.35
LPCAT3-210ENST00000540090 C1QTNF1Q9BXJ1 281 aa23.46■■□□□ 1.35
LPCAT3-210ENST00000540090 COG5Q9UP83 839 aa23.46■■□□□ 1.35
LPCAT3-210ENST00000540090 BAIAP3O94812 1187 aa23.45■■□□□ 1.34
LPCAT3-210ENST00000540090 ARIH2O95376 493 aa23.45■■□□□ 1.34
LPCAT3-210ENST00000540090 MCMDC2Q4G0Z9 681 aa23.45■■□□□ 1.34
LPCAT3-210ENST00000540090 KRT40Q6A162 431 aa23.45■■□□□ 1.34
LPCAT3-210ENST00000540090 CCDC62Q6P9F0 684 aa23.45■■□□□ 1.34
LPCAT3-210ENST00000540090 ARNTL2Q8WYA1 636 aa23.45■■□□□ 1.34
LPCAT3-210ENST00000540090 HSPD1P10809 573 aaKnown RBP23.44■■□□□ 1.34
LPCAT3-210ENST00000540090 TICAM2Q86XR7 235 aa23.44■■□□□ 1.34
LPCAT3-210ENST00000540090 FAM227BQ96M60 508 aa23.44■■□□□ 1.34
LPCAT3-210ENST00000540090 MAF1Q9H063 256 aa23.44■■□□□ 1.34
LPCAT3-210ENST00000540090 NOD1Q9Y239 953 aa23.44■■□□□ 1.34
LPCAT3-210ENST00000540090 TCF20Q9UGU0 1960 aaKnown RBP23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 PCP11498 1178 aaKnown RBP23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 GPNMBQ14956 572 aa23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 PTGISQ16647 500 aa23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 SESTD1Q86VW0 696 aa23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 CAGE1Q8TC20 777 aa23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 CTAGE1Q96RT6 745 aa23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 SCN5AQ14524 2016 aa23.43■■□□□ 1.34
LPCAT3-210ENST00000540090 ZMYM6O95789 1325 aa23.42■■□□□ 1.34
LPCAT3-210ENST00000540090 A0A0D9SFI3 127 aa23.42■■□□□ 1.34
LPCAT3-210ENST00000540090 TLL1O43897 1013 aa23.42■■□□□ 1.34
LPCAT3-210ENST00000540090 PLA2G5P39877 138 aa23.42■■□□□ 1.34
LPCAT3-210ENST00000540090 ANKRD45Q5TZF3 282 aa23.42■■□□□ 1.34
LPCAT3-210ENST00000540090 AFAP1L1Q8TED9 768 aa23.42■■□□□ 1.34
LPCAT3-210ENST00000540090 AFG1LQ8WV93 481 aa23.42■■□□□ 1.34
LPCAT3-210ENST00000540090 LPXNO60711 386 aa23.41■■□□□ 1.34
LPCAT3-210ENST00000540090 PDE1AP54750 535 aa23.41■■□□□ 1.34
LPCAT3-210ENST00000540090 HAND2P61296 217 aa23.41■■□□□ 1.34
LPCAT3-210ENST00000540090 GRB10Q13322 594 aa23.41■■□□□ 1.34
LPCAT3-210ENST00000540090 GPATCH4Q5T3I0 446 aaKnown RBP23.41■■□□□ 1.34
LPCAT3-210ENST00000540090 MFSD6Q6ZSS7 791 aa23.41■■□□□ 1.34
LPCAT3-210ENST00000540090 ZBTB47Q9UFB7 747 aaPredicted RBP23.41■■□□□ 1.34
LPCAT3-210ENST00000540090 KCNJ6P48051 423 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 CHMP4BP1P59074 171 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 USH1GQ495M9 461 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 GDF6Q6KF10 455 aaPredicted RBP23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 ZNF589Q86UQ0 364 aaPredicted RBP23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 CCDC155Q8N6L0 562 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 TET1Q8NFU7 2136 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 TBC1D5Q92609 795 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 KAT2BQ92831 832 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 HLA-CQ95604 372 aa23.4■■□□□ 1.34
LPCAT3-210ENST00000540090 PARNO95453 639 aaKnown RBP23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 GH1P01241 217 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 MMP3P08254 477 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 GOLGA8HP0CJ92 632 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 SELPP16109 830 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 WDR5P61964 334 aaKnown RBP23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 ARHGAP1Q07960 439 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 LY6KQ17RY6 165 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 SEPT14Q6ZU15 432 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 SPRED2Q7Z698 418 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 DGKHQ86XP1 1220 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 SYTL5Q8TDW5 730 aaPredicted RBP23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 NSUN6Q8TEA1 469 aaKnown RBP23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 FAM122AQ96E09 287 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 TAAR1Q96RJ0 339 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 UBA5Q9GZZ9 404 aa23.39■■□□□ 1.33
LPCAT3-210ENST00000540090 CASTP20810 708 aaKnown RBP23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 RBL2Q08999 1139 aa23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 TBC1D10CQ8IV04 446 aa23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 DHX38Q92620 1227 aaKnown RBP23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 IWS1Q96ST2 819 aa23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 CPVLQ9H3G5 476 aa23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 RNF41Q9H4P4 317 aaPredicted RBP23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 EPHX3Q9H6B9 360 aa23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 LMCD1Q9NZU5 365 aa23.38■■□□□ 1.33
LPCAT3-210ENST00000540090 LCHNA4D1U4 455 aa23.37■■□□□ 1.33
LPCAT3-210ENST00000540090 CXCL10P02778 98 aa23.37■■□□□ 1.33
LPCAT3-210ENST00000540090 NMIQ13287 307 aaPredicted RBP23.37■■□□□ 1.33
LPCAT3-210ENST00000540090 LRRC8DQ7L1W4 858 aa23.37■■□□□ 1.33
LPCAT3-210ENST00000540090 ESR2Q92731 530 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms