RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 MUC6Q6W4X9 2439 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 PRR33A8MZF0 331 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 NMT2O60551 498 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 CALML3P27482 149 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 NOVP48745 357 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 PDE4DQ08499 809 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 GPNMBQ14956 572 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 RNF207Q6ZRF8 634 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 RASGRP2Q7LDG7 609 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 ALYREFQ86V81 257 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 FAM178BQ8IXR5 827 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 GJD3Q8N144 294 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 CAGE1Q8TC20 777 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 GDPD5Q8WTR4 605 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 COPS5Q92905 334 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 SEC62Q99442 399 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 RAD9AQ99638 391 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 SUGCTQ9HAC7 445 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLSTN3-209ENST00000539982 PARNO95453 639 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 SELPP16109 830 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 EDNRBP24530 442 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 SLC16A2P36021 539 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 ERVK-21P61565 698 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 LEXMQ3ZCV2 418 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 SLC30A10Q6XR72 485 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 TMCO2Q7Z6W1 182 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 UBE2ZQ9H832 354 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 PNMA2Q9UL42 364 aa13.73□□□□□ -0.21
CLSTN3-209ENST00000539982 TANC1Q9C0D5 1861 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 BRWD1Q9NSI6 2320 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 ABHD14A-ACY1A0A1B0GW23 586 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 B4DLN1 442 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 GJB5O95377 273 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 CXCL10P02778 98 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 ALADP13716 330 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 CHMP4BP1P59074 171 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 DEFB103AP81534 67 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 CNKSR3Q6P9H4 555 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 DNERQ8NFT8 737 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 CTAGE1Q96RT6 745 aa13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 TRIP12Q14669 1992 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-209ENST00000539982 PTPRSQ13332 1948 aa13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 LINC01553A4QN01 128 aa13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 RPS6P62753 249 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 CTDSPL2Q05D32 466 aa13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 RBL2Q08999 1139 aa13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 GDF6Q6KF10 455 aaPredicted RBP13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 LRRC8DQ7L1W4 858 aa13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 MTUS1Q9ULD2 1270 aa13.71□□□□□ -0.21
CLSTN3-209ENST00000539982 COL4A4P53420 1690 aaPredicted RBP13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 NBNO60934 754 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 EFCAB14O75071 495 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 ARIH2O95376 493 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 KCNA5P22460 613 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 IKBKEQ14164 716 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 CCDC62Q6P9F0 684 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 AFG1LQ8WV93 481 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 DHX38Q92620 1227 aaKnown RBP13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
CLSTN3-209ENST00000539982 FRMPD2Q68DX3 1309 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 GRXCR2A6NFK2 248 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 ORC4O43929 436 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 MMP3P08254 477 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 FGRP09769 529 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 TOP1P11387 765 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 CKBP12277 381 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 IL9P15248 144 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 PUS10Q3MIT2 529 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 PTCRAQ6ISU1 281 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 RGS22Q8NE09 1264 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 KAT2BQ92831 832 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 CRBNQ96SW2 442 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
CLSTN3-209ENST00000539982 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
CLSTN3-209ENST00000539982 FOXP2O15409 715 aa13.68□□□□□ -0.22
CLSTN3-209ENST00000539982 GH1P01241 217 aa13.68□□□□□ -0.22
CLSTN3-209ENST00000539982 CSPP1Q1MSJ5 1256 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms