RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 MORC4Q8TE76 937 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 CLEC4DQ8WXI8 215 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
USB1-203ENST00000539737 HELLSQ9NRZ9 838 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 SYNPO2Q9UMS6 1093 aa17.58■□□□□ 0.4
USB1-203ENST00000539737 FAM86C2PA6NEL3 165 aa17.57■□□□□ 0.4
USB1-203ENST00000539737 TAP1Q03518 808 aa17.57■□□□□ 0.4
USB1-203ENST00000539737 PPP4R3BQ5MIZ7 849 aa17.57■□□□□ 0.4
USB1-203ENST00000539737 SYDE2Q5VT97 1194 aa17.57■□□□□ 0.4
USB1-203ENST00000539737 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
USB1-203ENST00000539737 TOMM22Q9NS69 142 aa17.57■□□□□ 0.4
USB1-203ENST00000539737 FDX1P10109 184 aa17.56■□□□□ 0.4
USB1-203ENST00000539737 PLA2G5P39877 138 aa17.56■□□□□ 0.4
USB1-203ENST00000539737 TMEM47Q9BQJ4 181 aa17.56■□□□□ 0.4
USB1-203ENST00000539737 MTG1Q9BT17 334 aaPredicted RBP17.56■□□□□ 0.4
USB1-203ENST00000539737 FTOQ9C0B1 505 aaKnown RBP eCLIP17.56■□□□□ 0.4
USB1-203ENST00000539737 MTUS1Q9ULD2 1270 aa17.56■□□□□ 0.4
USB1-203ENST00000539737 PLA2G6O60733 806 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 GSPT1P15170 499 aaKnown RBP17.55■□□□□ 0.4
USB1-203ENST00000539737 HAND2P61296 217 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 DEFB103AP81534 67 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 GRB10Q13322 594 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 GPNMBQ14956 572 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 GDPD5Q8WTR4 605 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 TBC1D5Q92609 795 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 DIAPH3Q9NSV4 1193 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 Q9Y3F1 56 aa17.55■□□□□ 0.4
USB1-203ENST00000539737 A0A0D9SFI3 127 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 LPXNO60711 386 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 SDSP20132 328 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
USB1-203ENST00000539737 NMIQ13287 307 aaPredicted RBP17.54■□□□□ 0.4
USB1-203ENST00000539737 USH1GQ495M9 461 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 MCMDC2Q4G0Z9 681 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 FAM227BQ96M60 508 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 CD320Q9NPF0 282 aa17.54■□□□□ 0.4
USB1-203ENST00000539737 RBM47A0AV96 593 aaKnown RBP17.53■□□□□ 0.4
USB1-203ENST00000539737 SORBS3O60504 671 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 RPS6P62753 249 aaKnown RBP17.53■□□□□ 0.4
USB1-203ENST00000539737 PDE4DQ08499 809 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 FAM117BQ6P1L5 589 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 RNF207Q6ZRF8 634 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 DCAF4Q8WV16 495 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 DHX38Q92620 1227 aaKnown RBP17.53■□□□□ 0.4
USB1-203ENST00000539737 FAM122AQ96E09 287 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 ZKSCAN3Q9BRR0 538 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
USB1-203ENST00000539737 PPP4R2Q9NY27 417 aa17.53■□□□□ 0.4
USB1-203ENST00000539737 CCDC171Q6TFL3 1326 aa17.52■□□□□ 0.4
USB1-203ENST00000539737 GTPBP6O43824 516 aaPredicted RBP17.52■□□□□ 0.4
USB1-203ENST00000539737 NOVP48745 357 aa17.52■□□□□ 0.4
USB1-203ENST00000539737 CPT1AP50416 773 aa17.52■□□□□ 0.4
USB1-203ENST00000539737 GDF6Q6KF10 455 aaPredicted RBP17.52■□□□□ 0.4
USB1-203ENST00000539737 AFG1LQ8WV93 481 aa17.52■□□□□ 0.4
USB1-203ENST00000539737 LRFN3Q9BTN0 628 aa17.52■□□□□ 0.4
USB1-203ENST00000539737 TSPYL2Q9H2G4 693 aaPredicted RBP17.52■□□□□ 0.4
USB1-203ENST00000539737 COL20A1Q9P218 1284 aa17.52■□□□□ 0.4
USB1-203ENST00000539737 TLL1O43897 1013 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 TXNP10599 105 aaKnown RBP17.51■□□□□ 0.39
USB1-203ENST00000539737 PDHBP11177 359 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 LY6KQ17RY6 165 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 BTNL9Q6UXG8 535 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
USB1-203ENST00000539737 TBC1D10CQ8IV04 446 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 WNT8BQ93098 351 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 C11orf16Q9NQ32 467 aa17.51■□□□□ 0.39
USB1-203ENST00000539737 ADD3Q9UEY8 706 aaKnown RBP17.51■□□□□ 0.39
USB1-203ENST00000539737 RAD50Q92878 1312 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 ORC4O43929 436 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 SUPT20HL2P0C7V6 817 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
USB1-203ENST00000539737 EDNRBP24530 442 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
USB1-203ENST00000539737 PTGISQ16647 500 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 SEPT14Q6ZU15 432 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 RETREG2Q8NC44 543 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 NOD1Q9Y239 953 aa17.5■□□□□ 0.39
USB1-203ENST00000539737 ZMYM6O95789 1325 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 A6NJR5 290 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 FGAP02671 866 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 PFKMP08237 780 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 ACTN1P12814 892 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
USB1-203ENST00000539737 NFRKBQ6P4R8 1299 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 CWC27Q6UX04 472 aaKnown RBP17.49■□□□□ 0.39
USB1-203ENST00000539737 KAT2BQ92831 832 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 TAAR1Q96RJ0 339 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
USB1-203ENST00000539737 NEDD4P46934 1319 aa17.48■□□□□ 0.39
USB1-203ENST00000539737 NBNO60934 754 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms