RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 FRMPD2Q68DX3 1309 aaPredicted RBP14□□□□□ -0.17
SFSWAP-208ENST00000539506 LGALS16A8MUM7 142 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 B4DLN1 442 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 IVLP07476 585 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 LDHCP07864 332 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 OR52Z1P0C646 297 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 NOVP48745 357 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 FAM71BQ8TC56 605 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 TBCKQ8TEA7 893 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 CRACR2AQ9BSW2 395 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 PSD3Q9NYI0 1048 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 SLURP2P0DP57 97 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 GYS1P13807 737 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 HERVK_113P62684 666 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 FBXW10Q5XX13 1052 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 RPGRQ92834 1020 aaKnown RBP14□□□□□ -0.17
SFSWAP-208ENST00000539506 JAKMIP2Q96AA8 810 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 HPCAL4Q9UM19 191 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 SAR1BQ9Y6B6 198 aa14□□□□□ -0.17
SFSWAP-208ENST00000539506 LOC102724159A0A0B4J2E5 919 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 ATP1A2P50993 1020 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 AMPD2Q01433 879 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 PWP2Q15269 919 aaKnown RBP13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 SND1Q7KZF4 910 aaKnown RBP eCLIP13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 THSD7AQ9UPZ6 1657 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 LAD1O00515 517 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 PTPROQ16827 1216 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 TBC1D16Q8TBP0 767 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 COA7Q96BR5 231 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 TRIM47Q96LD4 638 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 DNAJC7Q99615 494 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 LZTS2Q9BRK4 669 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 THAP9Q9H5L6 903 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 GGA1Q9UJY5 639 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 USP14P54578 494 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 IRX3P78415 501 aaPredicted RBP13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 SF3A3Q12874 501 aaKnown RBP eCLIP13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 WHAMMP3Q1A5X7 153 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 NEK8Q86SG6 692 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 SH2D3CQ8N5H7 860 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 KIAA0895Q8NCT3 520 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 TTYH3Q9C0H2 523 aa13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 LUC7L2Q9Y383 392 aaKnown RBP13.99□□□□□ -0.17
SFSWAP-208ENST00000539506 SLC37A4O43826 429 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 PDHBP11177 359 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 IDEP14735 1019 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 MAGEA9P43362 315 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 NT5C2P49902 561 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 ENOX2Q16206 610 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 KRT25Q7Z3Z0 450 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 PROCA1Q8NCQ7 364 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 UIMC1Q96RL1 719 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 SELENOOQ9BVL4 669 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 FAM107BQ9H098 131 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 GAKO14976 1311 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 NCK2O43639 380 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 TOM1O60784 492 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 SERPINB2P05120 415 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 EEF1GP26641 437 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 PDE4DQ08499 809 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 MIIPQ5JXC2 388 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 LRRC47Q8N1G4 583 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 CSGALNACT2Q8N6G5 542 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 FAM163AQ96GL9 167 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 NUDT12Q9BQG2 462 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 TUBGCP2Q9BSJ2 902 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 RIOX1Q9H6W3 641 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 MLXIPQ9HAP2 919 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 DDX4Q9NQI0 724 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 DMGDHQ9UI17 866 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 CAPN11Q9UMQ6 739 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 DAGLAQ9Y4D2 1042 aa13.98□□□□□ -0.17
SFSWAP-208ENST00000539506 PSMA7O14818 248 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 ZEB2O60315 1214 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 TRIM21P19474 475 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 TXKP42681 527 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 GRB10Q13322 594 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 TRIM14Q14142 442 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 TSR1Q2NL82 804 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 OR8K1Q8NGG5 319 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 MTMR9Q96QG7 549 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 C7orf25Q9BPX7 421 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 MXD3Q9BW11 206 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 SEMA6BQ9H3T3 888 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 C6orf50Q9HD87 102 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 BLOC1S4Q9NUP1 217 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 MYH1P12882 1939 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 A0A1W2PQC6 194 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 AGPSO00116 658 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 TDP2O95551 362 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 MYL1P05976 194 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 SRGNP10124 158 aa13.97□□□□□ -0.17
SFSWAP-208ENST00000539506 AKR1B1P15121 316 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms