RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 TXNP10599 105 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 TROAPQ12815 778 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 SEPT14Q6ZU15 432 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 CATIPQ7Z7H3 387 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 RNPC3Q96LT9 517 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 PIGSQ96S52 555 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 PCDHA1Q9Y5I3 950 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MYH6P13533 1939 aa22.16■■□□□ 1.14
TNFRSF1A-212ENST00000539372 NKRFO15226 690 aaKnown RBP eCLIP22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 EIF2AK2P19525 551 aaKnown RBP22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 CPT1AP50416 773 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 TTLL4Q14679 1199 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 ARHGEF16Q5VV41 709 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MFSD5Q6N075 450 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 TRPV6Q9H1D0 765 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 ANO2Q9NQ90 1003 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 POLR3EQ9NVU0 708 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 MTMR10Q9NXD2 777 aa22.15■■□□□ 1.14
TNFRSF1A-212ENST00000539372 SLC27A2O14975 620 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CYTH3O43739 400 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PURAQ00577 322 aaKnown RBP22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CASC1Q6TDU7 716 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PIBF1Q8WXW3 757 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 IWS1Q96ST2 819 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 MYL10Q9BUA6 226 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 RIOX1Q9H6W3 641 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 LY9Q9HBG7 655 aa22.14■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PRC1O43663 620 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 B4GALT4O60513 344 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CSF2RAP15509 400 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 HOXA13P31271 388 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CYP2C18P33260 490 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 HSD17B4P51659 736 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 COL9A3Q14050 684 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 STXBP2Q15833 593 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 BMP2KLQ5H9B9 411 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CREB3L3Q68CJ9 461 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 FAM161BQ96MY7 647 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PXMP2Q9NR77 195 aa22.13■■□□□ 1.13
TNFRSF1A-212ENST00000539372 LAMA2P24043 3122 aaKnown RBP22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PPIGQ13427 754 aaKnown RBP eCLIP22.12■■□□□ 1.136e-8■■■■□ 21.4
TNFRSF1A-212ENST00000539372 LY6KQ17RY6 165 aa22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 BRDTQ58F21 947 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CCDC62Q6P9F0 684 aa22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 ZNF654Q8IZM8 581 aa22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 TMEM199Q8N511 208 aa22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PPP1R13LQ8WUF5 828 aa22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 MTG1Q9BT17 334 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 HIPK3Q9H422 1215 aa22.12■■□□□ 1.13
TNFRSF1A-212ENST00000539372 UMODL1Q5DID0 1318 aa22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 NR3C2P08235 984 aa22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 ACRP10323 421 aa22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 MCM5P33992 734 aa22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 NECTIN1Q15223 517 aa22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 FAM109BQ6ICB4 259 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 NFXL1Q6ZNB6 911 aa22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.11■■□□□ 1.134e-6■■■■□ 19.4
TNFRSF1A-212ENST00000539372 SEZ6LQ9BYH1 1024 aa22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 ALDH8A1Q9H2A2 487 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PNMA6FA0A0J9YX94 578 aa22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 A6NJR5 290 aa22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 DDAH1O94760 285 aa22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 MYCLP12524 364 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 GHRHRQ02643 423 aa22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 ZNF697Q5TEC3 545 aa22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 C16orf59Q7L2K0 433 aa22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 AFG1LQ8WV93 481 aa22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 TRMT13Q9NUP7 481 aaKnown RBP22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 BAZ2BQ9UIF8 2168 aaKnown RBP22.1■■□□□ 1.13
TNFRSF1A-212ENST00000539372 SH2B2O14492 632 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 EIF3JO75822 258 aaKnown RBP22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 GH1P01241 217 aa22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CHMP4BP1P59074 171 aa22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 SMAD3P84022 425 aaKnown RBP22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 NBPF20Q3BBV1 942 aa22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 FAM47CQ5HY64 1035 aa22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 TMEM240Q5SV17 173 aa22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CTCFLQ8NI51 663 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 PDCD2LQ9BRP1 358 aa22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 NOC4LQ9BVI4 516 aaKnown RBP22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 LRRC2Q9BYS8 371 aa22.09■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CCDC69A6NI79 296 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 GCOM1H8Y6P7 765 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 KPNA6O60684 536 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 POLR2MP0CAP2 368 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 RXRAP19793 462 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 CCL23P55773 120 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 ARHGAP1Q07960 439 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 TRAF1Q13077 416 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 FCHSD1Q86WN1 690 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 RAB11FIP4Q86YS3 637 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 TMEM87BQ96K49 555 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 GUCD1Q96NT3 240 aa22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 MAP3K20Q9NYL2 800 aaKnown RBP22.08■■□□□ 1.13
TNFRSF1A-212ENST00000539372 MMP3P08254 477 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 CYP2C9P11712 490 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 KIF5BP33176 963 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 PGM5Q15124 567 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 ZNF365Q70YC5 407 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 IL31RAQ8NI17 732 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 876.1 ms