RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 COPS5Q92905 334 aa25.82■■□□□ 1.72
SCARB1-206ENST00000539320 RMDN3Q96TC7 470 aa25.82■■□□□ 1.72
SCARB1-206ENST00000539320 SCN10AQ9Y5Y9 1956 aa25.82■■□□□ 1.72
SCARB1-206ENST00000539320 LAMA2P24043 3122 aaKnown RBP25.81■■□□□ 1.72
SCARB1-206ENST00000539320 BAZ2BQ9UIF8 2168 aaKnown RBP25.81■■□□□ 1.72
SCARB1-206ENST00000539320 ARIH2O95376 493 aa25.81■■□□□ 1.72
SCARB1-206ENST00000539320 TXNP10599 105 aaKnown RBP25.81■■□□□ 1.72
SCARB1-206ENST00000539320 ANTXR2P58335 489 aa25.81■■□□□ 1.72
SCARB1-206ENST00000539320 TMEM67Q5HYA8 995 aa25.81■■□□□ 1.72
SCARB1-206ENST00000539320 CHST3Q7LGC8 479 aa25.81■■□□□ 1.72
SCARB1-206ENST00000539320 HOMER1Q86YM7 354 aa25.81■■□□□ 1.72
SCARB1-206ENST00000539320 IWS1Q96ST2 819 aa25.81■■□□□ 1.72
SCARB1-206ENST00000539320 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.81■■□□□ 1.725e-8■□□□□ 8.8
SCARB1-206ENST00000539320 MTG1Q9BT17 334 aaPredicted RBP25.81■■□□□ 1.72
SCARB1-206ENST00000539320 HIPK3Q9H422 1215 aa25.81■■□□□ 1.72
SCARB1-206ENST00000539320 GPHNQ9NQX3 736 aaPredicted RBP25.81■■□□□ 1.72
SCARB1-206ENST00000539320 OPLAHO14841 1288 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 B4GALT4O60513 344 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 PPP1R11O60927 126 aaPredicted RBP25.8■■□□□ 1.72
SCARB1-206ENST00000539320 CFBP00751 764 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 CSF2RAP15509 400 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 CYP2C18P33260 490 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 GHRHRQ02643 423 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 SLC35G1Q2M3R5 365 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 FAM161BQ96MY7 647 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 GUCD1Q96NT3 240 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 TRPV6Q9H1D0 765 aa25.8■■□□□ 1.72
SCARB1-206ENST00000539320 EIF2AK2P19525 551 aaKnown RBP25.79■■□□□ 1.72
SCARB1-206ENST00000539320 HSD17B4P51659 736 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 TROAPQ12815 778 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 STXBP2Q15833 593 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 ARHGEF16Q5VV41 709 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 PSRC1Q6PGN9 363 aaPredicted RBP25.79■■□□□ 1.72
SCARB1-206ENST00000539320 CATIPQ7Z7H3 387 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 ESYT1Q9BSJ8 1104 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 LSG1Q9H089 658 aaKnown RBP25.79■■□□□ 1.72
SCARB1-206ENST00000539320 ALDH8A1Q9H2A2 487 aaPredicted RBP25.79■■□□□ 1.72
SCARB1-206ENST00000539320 RIOX1Q9H6W3 641 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 PXMP2Q9NR77 195 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 PCDHA1Q9Y5I3 950 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 COL6A3P12111 3177 aa25.79■■□□□ 1.72
SCARB1-206ENST00000539320 A6NJR5 290 aa25.78■■□□□ 1.72
SCARB1-206ENST00000539320 KPNA6O60684 536 aa25.78■■□□□ 1.72
SCARB1-206ENST00000539320 TMEM240Q5SV17 173 aa25.78■■□□□ 1.72
SCARB1-206ENST00000539320 CCDC62Q6P9F0 684 aa25.78■■□□□ 1.72
SCARB1-206ENST00000539320 SEPT14Q6ZU15 432 aa25.78■■□□□ 1.72
SCARB1-206ENST00000539320 PIGSQ96S52 555 aa25.78■■□□□ 1.72
SCARB1-206ENST00000539320 NOC4LQ9BVI4 516 aaKnown RBP25.78■■□□□ 1.72
SCARB1-206ENST00000539320 KIAA1217Q5T5P2 1943 aa25.77■■□□□ 1.72
SCARB1-206ENST00000539320 TRAF1Q13077 416 aa25.77■■□□□ 1.72
SCARB1-206ENST00000539320 CENPQQ7L2Z9 268 aaPredicted RBP25.77■■□□□ 1.72
SCARB1-206ENST00000539320 IGDCC4Q8TDY8 1250 aa25.77■■□□□ 1.72
SCARB1-206ENST00000539320 UMODL1Q5DID0 1318 aa25.77■■□□□ 1.72
SCARB1-206ENST00000539320 CYTH3O43739 400 aa25.76■■□□□ 1.71
SCARB1-206ENST00000539320 GH1P01241 217 aa25.76■■□□□ 1.71
SCARB1-206ENST00000539320 CASC1Q6TDU7 716 aa25.76■■□□□ 1.71
SCARB1-206ENST00000539320 C16orf59Q7L2K0 433 aa25.76■■□□□ 1.71
SCARB1-206ENST00000539320 IL23AQ9NPF7 189 aa25.76■■□□□ 1.71
SCARB1-206ENST00000539320 MAP3K20Q9NYL2 800 aaKnown RBP25.76■■□□□ 1.71
SCARB1-206ENST00000539320 TMEM265A0A087WTH1 108 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 DDAH1O94760 285 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 NR3C2P08235 984 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 ACRP10323 421 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 BMP2KLQ5H9B9 411 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 FAM47CQ5HY64 1035 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 SAMD3Q8N6K7 520 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 MTA3Q9BTC8 594 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 LY9Q9HBG7 655 aa25.75■■□□□ 1.71
SCARB1-206ENST00000539320 TRMT13Q9NUP7 481 aaKnown RBP25.75■■□□□ 1.71
SCARB1-206ENST00000539320 PNMA6FA0A0J9YX94 578 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.74■■□□□ 1.71
SCARB1-206ENST00000539320 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.74■■□□□ 1.71
SCARB1-206ENST00000539320 SLC27A2O14975 620 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 PRC1O43663 620 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 EIF3JO75822 258 aaKnown RBP25.74■■□□□ 1.71
SCARB1-206ENST00000539320 SUPT20HL2P0C7V6 817 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 ARHGAP1Q07960 439 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 LY6KQ17RY6 165 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 NBPF20Q3BBV1 942 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 RASIP1Q5U651 963 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 ZNF365Q70YC5 407 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 ZNF654Q8IZM8 581 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 AFG1LQ8WV93 481 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 PDCD2LQ9BRP1 358 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 WNT8AQ9H1J5 351 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 TTYH1Q9H313 450 aaPredicted RBP25.74■■□□□ 1.71
SCARB1-206ENST00000539320 SEMA6BQ9H3T3 888 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 ANO2Q9NQ90 1003 aa25.74■■□□□ 1.71
SCARB1-206ENST00000539320 MMP3P08254 477 aa25.73■■□□□ 1.71
SCARB1-206ENST00000539320 HOXA13P31271 388 aaPredicted RBP25.73■■□□□ 1.71
SCARB1-206ENST00000539320 CCL23P55773 120 aa25.73■■□□□ 1.71
SCARB1-206ENST00000539320 NFRKBQ6P4R8 1299 aa25.73■■□□□ 1.71
SCARB1-206ENST00000539320 SLC17A8Q8NDX2 589 aa25.73■■□□□ 1.71
SCARB1-206ENST00000539320 CTCFLQ8NI51 663 aaPredicted RBP25.73■■□□□ 1.71
SCARB1-206ENST00000539320 MAP3K14Q99558 947 aa25.73■■□□□ 1.71
SCARB1-206ENST00000539320 MRVI1Q9Y6F6 885 aa25.73■■□□□ 1.71
SCARB1-206ENST00000539320 GCOM1H8Y6P7 765 aaPredicted RBP25.72■■□□□ 1.71
SCARB1-206ENST00000539320 POLR2MP0CAP2 368 aa25.72■■□□□ 1.71
SCARB1-206ENST00000539320 MCM5P33992 734 aa25.72■■□□□ 1.71
SCARB1-206ENST00000539320 CREB3L3Q68CJ9 461 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms