RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 TSPYL6Q8N831 410 aa9.84□□□□□ -0.83
TUBD1-206ENST00000539018 CPLX3Q8WVH0 158 aa9.84□□□□□ -0.83
TUBD1-206ENST00000539018 SRRTQ9BXP5 876 aaKnown RBP9.84□□□□□ -0.83
TUBD1-206ENST00000539018 STRIP2Q9ULQ0 834 aa9.84□□□□□ -0.83
TUBD1-206ENST00000539018 LEMD3Q9Y2U8 911 aa9.84□□□□□ -0.83
TUBD1-206ENST00000539018 ELL2O00472 640 aaPredicted RBP9.83□□□□□ -0.84
TUBD1-206ENST00000539018 RNMTO43148 476 aaKnown RBP9.83□□□□□ -0.84
TUBD1-206ENST00000539018 DNAJA1P31689 397 aaKnown RBP9.83□□□□□ -0.84
TUBD1-206ENST00000539018 CDCP2Q5VXM1 449 aa9.83□□□□□ -0.84
TUBD1-206ENST00000539018 ZNF746Q6NUN9 644 aaPredicted RBP9.83□□□□□ -0.84
TUBD1-206ENST00000539018 DDX17Q92841 729 aaKnown RBP9.83□□□□□ -0.84
TUBD1-206ENST00000539018 ATG4CQ96DT6 458 aa9.83□□□□□ -0.84
TUBD1-206ENST00000539018 CCDC74BQ96LY2 380 aa9.83□□□□□ -0.84
TUBD1-206ENST00000539018 CNNM2Q9H8M5 875 aa9.83□□□□□ -0.84
TUBD1-206ENST00000539018 PIM2Q9P1W9 311 aa9.83□□□□□ -0.84
TUBD1-206ENST00000539018 GTF2IRD1Q9UHL9 959 aa9.83□□□□□ -0.84
TUBD1-206ENST00000539018 TPX2Q9ULW0 747 aaKnown RBP9.83□□□□□ -0.84
TUBD1-206ENST00000539018 MEGF6O75095 1541 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 NWD2Q9ULI1 1742 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 PRR19A6NJB7 356 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 EOMESO95936 686 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 TGFB1P01137 390 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 CCT4P50991 539 aaKnown RBP9.82□□□□□ -0.84
TUBD1-206ENST00000539018 EIF6P56537 245 aaKnown RBP9.82□□□□□ -0.84
TUBD1-206ENST00000539018 NLRC3Q7RTR2 1065 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 IFNL2Q8IZJ0 200 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 RBBP8NLQ8NC74 664 aaPredicted RBP9.82□□□□□ -0.84
TUBD1-206ENST00000539018 IL17REQ8NFR9 667 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 RIN3Q8TB24 985 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 SHANK3Q9BYB0 1731 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 COL16A1Q07092 1604 aaPredicted RBP9.82□□□□□ -0.84
TUBD1-206ENST00000539018 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
TUBD1-206ENST00000539018 BTBD11A6QL63 1104 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 NME1P15531 152 aaKnown RBP9.81□□□□□ -0.84
TUBD1-206ENST00000539018 BECN1Q14457 450 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 INTS3Q68E01 1043 aaKnown RBP9.81□□□□□ -0.84
TUBD1-206ENST00000539018 CDH24Q86UP0 819 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 GCC1Q96CN9 775 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 KIF2CQ99661 725 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.81□□□□□ -0.84
TUBD1-206ENST00000539018 PRDM5Q9NQX1 630 aaPredicted RBP9.81□□□□□ -0.84
TUBD1-206ENST00000539018 ZBTB40Q9NUA8 1239 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 CEP131Q9UPN4 1083 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 PAPPAQ13219 1627 aa9.81□□□□□ -0.84
TUBD1-206ENST00000539018 CYP26A1O43174 497 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 SSBP05455 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
TUBD1-206ENST00000539018 GBP1P32455 592 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 ETV3P41162 512 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 CHRNA2Q15822 529 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 TOM1L2Q6ZVM7 507 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 LSRQ86X29 649 aaPredicted RBP9.8□□□□□ -0.84
TUBD1-206ENST00000539018 DNAJB8Q8NHS0 232 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 BAHD1Q8TBE0 780 aaPredicted RBP9.8□□□□□ -0.84
TUBD1-206ENST00000539018 LRRC4CQ9HCJ2 640 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 RNF112Q9ULX5 631 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 MAPK8IP1Q9UQF2 711 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 TNNQ9UQP3 1299 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 UBR2Q8IWV8 1755 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 RGS12O14924 1447 aa9.8□□□□□ -0.84
TUBD1-206ENST00000539018 LRP6O75581 1613 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 RGS13O14921 159 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 FGRP09769 529 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 PHKG2P15735 406 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 CYP7A1P22680 504 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 GIPRP48546 466 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 CHMP4BP1P59074 171 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 ARHGAP27Q6ZUM4 889 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 FAM214BQ7L5A3 538 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 OR6P1Q8NGX9 317 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 PPP1R13LQ8WUF5 828 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 SHDQ96IW2 340 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 HEXIM2Q96MH2 286 aaKnown RBP9.79□□□□□ -0.84
TUBD1-206ENST00000539018 GMLQ99445 158 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 TM9SF2Q99805 663 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 C5P01031 1676 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 NRAPQ86VF7 1730 aa9.79□□□□□ -0.84
TUBD1-206ENST00000539018 IGF2BP3O00425 579 aaKnown RBP eCLIP9.78□□□□□ -0.84
TUBD1-206ENST00000539018 TNFRSF10CO14798 259 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 HMMRO75330 724 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 FOSL1P15407 271 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 POLR2BP30876 1174 aaKnown RBP9.78□□□□□ -0.84
TUBD1-206ENST00000539018 GRIK1P39086 918 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 EVA1CP58658 441 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 EIF4A1P60842 406 aaKnown RBP9.78□□□□□ -0.84
TUBD1-206ENST00000539018 SFRP5Q5T4F7 317 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 SLC52A2Q9HAB3 445 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 HDAC5Q9UQL6 1122 aa9.78□□□□□ -0.84
TUBD1-206ENST00000539018 KDM6AO15550 1401 aaPredicted RBP9.78□□□□□ -0.84
TUBD1-206ENST00000539018 IGHDP01880 384 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 GNAI3P08754 354 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 IL2RBP14784 551 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 CCNFP41002 786 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 KRT24Q2M2I5 525 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 MCF2L2Q86YR7 1114 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 RPAP2Q8IXW5 612 aaPredicted RBP9.77□□□□□ -0.85
TUBD1-206ENST00000539018 SMC5Q8IY18 1101 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 TTC5Q8N0Z6 440 aa9.77□□□□□ -0.85
TUBD1-206ENST00000539018 TAB3Q8N5C8 712 aaPredicted RBP9.77□□□□□ -0.85
TUBD1-206ENST00000539018 FAM181AQ8N9Y4 354 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms