RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 RGS22Q8NE09 1264 aa14.65□□□□□ -0.06
VAMP1-206ENST00000538970 SCFD2Q8WU76 684 aa14.65□□□□□ -0.06
VAMP1-206ENST00000538970 ZSCAN10Q96SZ4 725 aaPredicted RBP14.65□□□□□ -0.06
VAMP1-206ENST00000538970 CXXC1Q9P0U4 656 aaPredicted RBP14.65□□□□□ -0.06
VAMP1-206ENST00000538970 TNKSO95271 1327 aa14.65□□□□□ -0.06
VAMP1-206ENST00000538970 REV3LO60673 3130 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 FGBP02675 491 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 MYL3P08590 195 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 CCDC85BQ15834 202 aaPredicted RBP14.64□□□□□ -0.07
VAMP1-206ENST00000538970 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
VAMP1-206ENST00000538970 ASPRV1Q53RT3 343 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 MTG1Q9BT17 334 aaPredicted RBP14.64□□□□□ -0.07
VAMP1-206ENST00000538970 MAF1Q9H063 256 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 IL25Q9H293 177 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 MTIF3Q9H2K0 278 aaKnown RBP14.64□□□□□ -0.07
VAMP1-206ENST00000538970 TRMT13Q9NUP7 481 aaKnown RBP14.64□□□□□ -0.07
VAMP1-206ENST00000538970 ABCB11O95342 1321 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 RAD50Q92878 1312 aa14.64□□□□□ -0.07
VAMP1-206ENST00000538970 CHD9Q3L8U1 2897 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 A6NJR5 290 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 B4DLN1 442 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 ARIH2O95376 493 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 MRPL12P52815 198 aaKnown RBP14.63□□□□□ -0.07
VAMP1-206ENST00000538970 ADGRE1Q14246 886 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 BRDTQ58F21 947 aaPredicted RBP14.63□□□□□ -0.07
VAMP1-206ENST00000538970 ADGRF4Q8IZF3 695 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 COPS5Q92905 334 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 VWCEQ96DN2 955 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 PRDM12Q9H4Q4 367 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 ZSWIM5Q9P217 1185 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
VAMP1-206ENST00000538970 BDP1A6H8Y1 2624 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 SUPT20HL2P0C7V6 817 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 TXNP10599 105 aaKnown RBP14.62□□□□□ -0.07
VAMP1-206ENST00000538970 CYP2C9P11712 490 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 MRPS5P82675 430 aaKnown RBP14.62□□□□□ -0.07
VAMP1-206ENST00000538970 RAB30Q15771 203 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 QRICH1Q2TAL8 776 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 OTOP2Q7RTS6 562 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 SYTL5Q8TDW5 730 aaPredicted RBP14.62□□□□□ -0.07
VAMP1-206ENST00000538970 TBC1D5Q92609 795 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 SCLYQ96I15 445 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 KRT23Q9C075 422 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 GPHNQ9NQX3 736 aaPredicted RBP14.62□□□□□ -0.07
VAMP1-206ENST00000538970 COL20A1Q9P218 1284 aa14.62□□□□□ -0.07
VAMP1-206ENST00000538970 KPNA6O60684 536 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 PARP1P09874 1014 aaKnown RBP14.61□□□□□ -0.07
VAMP1-206ENST00000538970 TTLL4Q14679 1199 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 NBPF20Q3BBV1 942 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 NFRKBQ6P4R8 1299 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 CCDC62Q6P9F0 684 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 RPUSD2Q8IZ73 545 aaKnown RBP14.61□□□□□ -0.07
VAMP1-206ENST00000538970 TAAR1Q96RJ0 339 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 GAS2L1Q99501 681 aaPredicted RBP14.61□□□□□ -0.07
VAMP1-206ENST00000538970 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 CNNM2Q9H8M5 875 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 JMJD4Q9H9V9 463 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 MSRAQ9UJ68 235 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 SCN10AQ9Y5Y9 1956 aa14.61□□□□□ -0.07
VAMP1-206ENST00000538970 DHX16O60231 1041 aaKnown RBP14.6□□□□□ -0.07
VAMP1-206ENST00000538970 PFKMP08237 780 aa14.6□□□□□ -0.07
VAMP1-206ENST00000538970 GSPT1P15170 499 aaKnown RBP14.6□□□□□ -0.07
VAMP1-206ENST00000538970 PDE4AP27815 886 aa14.6□□□□□ -0.07
VAMP1-206ENST00000538970 PTPN11Q06124 597 aaPredicted RBP14.6□□□□□ -0.07
VAMP1-206ENST00000538970 FAM47CQ5HY64 1035 aa14.6□□□□□ -0.07
VAMP1-206ENST00000538970 FBXO11Q86XK2 927 aa14.6□□□□□ -0.07
VAMP1-206ENST00000538970 MCF2L2Q86YR7 1114 aa14.6□□□□□ -0.07
VAMP1-206ENST00000538970 NSUN6Q8TEA1 469 aaKnown RBP14.6□□□□□ -0.07
VAMP1-206ENST00000538970 PPP1R13LQ8WUF5 828 aa14.6□□□□□ -0.07
VAMP1-206ENST00000538970 NKX2-4Q9H2Z4 354 aa14.6□□□□□ -0.07
VAMP1-206ENST00000538970 YBX2Q9Y2T7 364 aaKnown RBP14.6□□□□□ -0.07
VAMP1-206ENST00000538970 MMP3P08254 477 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 ARHGAP1Q07960 439 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 SEC23AQ15436 765 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 IFIT1BQ5T764 474 aaKnown RBP14.59□□□□□ -0.07
VAMP1-206ENST00000538970 TTC22Q5TAA0 569 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 STAG2Q8N3U4 1231 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 IWS1Q96ST2 819 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 RMDN3Q96TC7 470 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 C1QTNF1Q9BXJ1 281 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 MRPL11Q9Y3B7 192 aaKnown RBP14.59□□□□□ -0.07
VAMP1-206ENST00000538970 SLC4A7Q9Y6M7 1214 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 TANC1Q9C0D5 1861 aa14.59□□□□□ -0.07
VAMP1-206ENST00000538970 ZBBXA8MT70 800 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 OPLAHO14841 1288 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 GH1P01241 217 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 EIF2AK2P19525 551 aaKnown RBP14.58□□□□□ -0.08
VAMP1-206ENST00000538970 RFC2P35250 354 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 RABGGTBP53611 331 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 GHRHRQ02643 423 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 STXBP2Q15833 593 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 LY6KQ17RY6 165 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 SEPT14Q6ZU15 432 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 CYB5R4Q7L1T6 521 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 AFG1LQ8WV93 481 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 LRFN3Q9BTN0 628 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 AMNQ9BXJ7 453 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 EPHX3Q9H6B9 360 aa14.58□□□□□ -0.08
VAMP1-206ENST00000538970 SLC28A3Q9HAS3 691 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms