RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GK5Q6ZS86 529 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 KBTBD2Q8IY47 623 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 FIBCD1Q8N539 461 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 Q8TCH9 128 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 MYO15BQ96JP2 1530 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 SLC9A7Q96T83 725 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 SEMA4AQ9H3S1 761 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 TESMINQ9Y4I5 508 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 DCAF1Q9Y4B6 1507 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 USP31Q70CQ4 1352 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 NTRK1P04629 796 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 STAT5AP42229 794 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 DPTQ07507 201 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 RNF207Q6ZRF8 634 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 MBD6Q96DN6 1003 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 ZSWIM3Q96MP5 696 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 FAM161BQ96MY7 647 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 CRAMP1Q96RY5 1269 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 MTA3Q9BTC8 594 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 RSRP1Q9BUV0 290 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 NOL6Q9H6R4 1146 aaKnown RBP3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 L2HGDHQ9H9P8 463 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 PCDH18Q9HCL0 1135 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 GP6Q9HCN6 339 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 SUCOQ9UBS9 1254 aaKnown RBP3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 PARP2Q9UGN5 583 aa3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 ZFR2Q9UPR6 939 aaKnown RBP3.56□□□□□ -1.84
CBX3P4-201ENST00000538909 A0A087X1B8 175 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 B4GALT4O60513 344 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 ZNF28P17035 718 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 MCM4P33991 863 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 CRKP46108 304 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 DGCR2P98153 550 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 PWP1Q13610 501 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 PPP2R5DQ14738 602 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 SEZ6Q53EL9 994 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 HS1BP3Q53T59 392 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 MIIPQ5JXC2 388 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 SLFN13Q68D06 897 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 FBXL19Q6PCT2 694 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 ZC3H18Q86VM9 953 aaKnown RBP3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 CPNE8Q86YQ8 564 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 NEU4Q8WWR8 484 aaPredicted RBP3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 ZG16BQ96DA0 208 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 ZNF503Q96F45 646 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 TMEM168Q9H0V1 697 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 EHMT1Q9H9B1 1298 aa3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 SF3B6Q9Y3B4 125 aaKnown RBP3.55□□□□□ -1.84
CBX3P4-201ENST00000538909 STXBP3O00186 592 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 TNFRSF10CO14798 259 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 NARSO43776 548 aaKnown RBP3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 FUCA1P04066 466 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 TP53P04637 393 aaPredicted RBP3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 MCM7P33993 719 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 IL13P35225 146 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 PURAQ00577 322 aaKnown RBP3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 POU4F1Q01851 419 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 PRKD1Q15139 912 aaPredicted RBP3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 USP39Q53GS9 565 aaKnown RBP3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 AXDND1Q5T1B0 1012 aaPredicted RBP3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 PPFIBP1Q86W92 1011 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 DHRS1Q96LJ7 313 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 YTHDC1Q96MU7 727 aaKnown RBP3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 GNRHR2Q96P88 292 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 ADOQ96SZ5 270 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 LRRC3Q9BY71 257 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 MEGF9Q9H1U4 602 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 KBTBD4Q9NVX7 518 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 ZDHHC9Q9Y397 364 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 FHOD1Q9Y613 1164 aa3.54□□□□□ -1.84
CBX3P4-201ENST00000538909 DAB2P98082 770 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 PTH1RQ03431 593 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 PDE4CQ08493 712 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 ADAM9Q13443 819 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 LSM12Q3MHD2 195 aaKnown RBP3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 EAPPQ56P03 285 aaPredicted RBP3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 RCSD1Q6JBY9 416 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 DPY19L2P1Q6NXN4 242 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 PKN3Q6P5Z2 889 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 EXTL1Q92935 676 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 MCMBPQ9BTE3 642 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 AP5M1Q9H0R1 490 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 COPRSQ9NQ92 184 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 DLL4Q9NR61 685 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 ZNF451Q9Y4E5 1061 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 SUPT16HQ9Y5B9 1047 aaKnown RBP3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 ABCC9O60706 1549 aa3.53□□□□□ -1.84
CBX3P4-201ENST00000538909 ROBO2Q9HCK4 1378 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 FOXS1O43638 330 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 ITGA4P13612 1032 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 ATXN1P54253 815 aaKnown RBP3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 PMS1P54277 932 aaKnown RBP3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 INHBCP55103 352 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 MLLT6P55198 1093 aaPredicted RBP3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 CSRP2Q16527 193 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 DPY19L1Q2PZI1 675 aa3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 LRRFIP1Q32MZ4 808 aaKnown RBP3.52□□□□□ -1.85
CBX3P4-201ENST00000538909 EEF1DP3Q658K8 133 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms