RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.26
ATL3-203ENST00000538786 GJA3Q9Y6H8 435 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 SREBF1P36956 1147 aa16.64■□□□□ 0.25
ATL3-203ENST00000538786 CCZ1BP86790 482 aa16.64■□□□□ 0.25
ATL3-203ENST00000538786 CCZ1P86791 482 aaPredicted RBP16.64■□□□□ 0.25
ATL3-203ENST00000538786 ARMCX5Q6P1M9 558 aa16.64■□□□□ 0.25
ATL3-203ENST00000538786 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
ATL3-203ENST00000538786 GIMAP8Q8ND71 665 aaPredicted RBP16.64■□□□□ 0.25
ATL3-203ENST00000538786 SNX29Q8TEQ0 813 aa16.64■□□□□ 0.25
ATL3-203ENST00000538786 CCDC47Q96A33 483 aaKnown RBP16.64■□□□□ 0.25
ATL3-203ENST00000538786 PNMA5Q96PV4 448 aa16.64■□□□□ 0.25
ATL3-203ENST00000538786 GTPBP4Q9BZE4 634 aaKnown RBP16.64■□□□□ 0.25
ATL3-203ENST00000538786 FEM1BQ9UK73 627 aa16.64■□□□□ 0.25
ATL3-203ENST00000538786 SFPQP23246 707 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATL3-203ENST00000538786 PRCPP42785 496 aa16.63■□□□□ 0.25
ATL3-203ENST00000538786 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
ATL3-203ENST00000538786 SV2BQ7L1I2 683 aa16.63■□□□□ 0.25
ATL3-203ENST00000538786 SLFN12Q8IYM2 578 aa16.63■□□□□ 0.25
ATL3-203ENST00000538786 ADSSL1Q8N142 457 aa16.63■□□□□ 0.25
ATL3-203ENST00000538786 NELFBQ8WX92 580 aa16.63■□□□□ 0.25
ATL3-203ENST00000538786 GLIS2Q9BZE0 524 aaPredicted RBP16.63■□□□□ 0.25
ATL3-203ENST00000538786 BLOC1S4Q9NUP1 217 aa16.63■□□□□ 0.25
ATL3-203ENST00000538786 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
ATL3-203ENST00000538786 GDAQ9Y2T3 454 aa16.63■□□□□ 0.25
ATL3-203ENST00000538786 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
ATL3-203ENST00000538786 Q4G0T1 1027 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 TBC1D10BQ4KMP7 808 aaPredicted RBP16.62■□□□□ 0.25
ATL3-203ENST00000538786 TMEM119Q4V9L6 283 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 A0A1B0GTH6 734 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
ATL3-203ENST00000538786 TBX3O15119 743 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 SLC26A4O43511 780 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 CTNND1O60716 968 aaKnown RBP16.62■□□□□ 0.25
ATL3-203ENST00000538786 STIM1Q13586 685 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 KIF4BQ2VIQ3 1234 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 APTXQ7Z2E3 356 aaKnown RBP16.62■□□□□ 0.25
ATL3-203ENST00000538786 NLGN2Q8NFZ4 835 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 LARP4BQ92615 738 aaKnown RBP16.62■□□□□ 0.25
ATL3-203ENST00000538786 FEZ1Q99689 392 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 NUDT12Q9BQG2 462 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 ZNF341Q9BYN7 854 aa16.62■□□□□ 0.25
ATL3-203ENST00000538786 TAL1P17542 331 aaPredicted RBP16.61■□□□□ 0.25
ATL3-203ENST00000538786 HOXA13P31271 388 aaPredicted RBP16.61■□□□□ 0.25
ATL3-203ENST00000538786 CIITAP33076 1130 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 ASIC1P78348 528 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 NR1I3Q14994 352 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
ATL3-203ENST00000538786 HYIQ5T013 277 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 RAD54LQ92698 747 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 LRRC27Q9C0I9 530 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 DEFB129Q9H1M3 183 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 EXOC1Q9NV70 894 aa16.61■□□□□ 0.25
ATL3-203ENST00000538786 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
ATL3-203ENST00000538786 CYP3A4P08684 503 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 SPAG1Q07617 926 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 PDE4DQ08499 809 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
ATL3-203ENST00000538786 ETNPPLQ8TBG4 499 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 LPAR1Q92633 364 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 GJA10Q969M2 543 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 MAPK8IP1Q9UQF2 711 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 MRPL11Q9Y3B7 192 aaKnown RBP16.6■□□□□ 0.25
ATL3-203ENST00000538786 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
ATL3-203ENST00000538786 ZNF541Q9H0D2 1346 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 KDM3AQ9Y4C1 1321 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 PVALEFA0A1B0GWK0 134 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 PSMA7O14818 248 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 NRDCO43847 1150 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 PPP1R2P41236 205 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 MCM6Q14566 821 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 PRR16Q569H4 304 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 SPECC1LQ69YQ0 1117 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 CNNM4Q6P4Q7 775 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 DHTKD1Q96HY7 919 aaPredicted RBP16.6■□□□□ 0.25
ATL3-203ENST00000538786 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 ADD3Q9UEY8 706 aaKnown RBP16.6■□□□□ 0.25
ATL3-203ENST00000538786 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
ATL3-203ENST00000538786 MYMKA6NI61 221 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 H7C1D1 291 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 TERF1P54274 439 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 TBX2Q13207 712 aaPredicted RBP16.59■□□□□ 0.25
ATL3-203ENST00000538786 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 LENG9Q96B70 501 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 LIMA1Q9UHB6 759 aaKnown RBP16.59■□□□□ 0.25
ATL3-203ENST00000538786 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
ATL3-203ENST00000538786 ABCB11O95342 1321 aa16.59■□□□□ 0.25
ATL3-203ENST00000538786 LRRC10BA6NIK2 292 aa16.58■□□□□ 0.25
ATL3-203ENST00000538786 FAM86B1E9PN63 330 aa16.58■□□□□ 0.25
ATL3-203ENST00000538786 GCOM1H8Y6P7 765 aaPredicted RBP16.58■□□□□ 0.25
ATL3-203ENST00000538786 WDR46O15213 610 aaKnown RBP16.58■□□□□ 0.25
ATL3-203ENST00000538786 FAM86B2P0C5J1 330 aa16.58■□□□□ 0.25
ATL3-203ENST00000538786 POLR2MP0CAP2 368 aa16.58■□□□□ 0.25
ATL3-203ENST00000538786 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms