RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MAGEA1P43355 309 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 KLHDC7AQ5VTJ3 777 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 KIF6Q6ZMV9 814 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 RNF10Q8N5U6 811 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 MAGEC3Q8TD91 643 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 MIEF2Q96C03 454 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 CENPHQ9H3R5 247 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 GUCY2FP51841 1108 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 ANKRD40Q6AI12 368 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 SALL4Q9UJQ4 1053 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 COL22A1Q8NFW1 1626 aaPredicted RBP20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 ZSCAN5CA6NGD5 496 aaPredicted RBP20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 MINDY4BA8MYZ0 360 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 DDAH1O94760 285 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 MRPL12P52815 198 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 PARP9Q8IXQ6 854 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 MS4A14Q96JA4 679 aa20.57■□□□□ 0.88
SFSWAP-207ENST00000538548 ARAP2Q8WZ64 1704 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 GOLGA6L10A6NI86 522 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 CYB5D1Q6P9G0 228 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 SCG2P13521 617 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 HSPA9P38646 679 aaKnown RBP20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 PPP1R2P41236 205 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 FUKQ8N0W3 1084 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 MIGA1Q8NAN2 632 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 MTMR8Q96EF0 704 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 TMBIM4Q9HC24 238 aa20.56■□□□□ 0.88
SFSWAP-207ENST00000538548 MROH5Q6ZUA9 1318 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 LRIG3Q6UXM1 1119 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 DTHD1Q6ZMT9 781 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 MAATS1Q7Z4T9 603 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 ZCRB1Q8TBF4 217 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 CASKIN2Q8WXE0 1202 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 SGSM3Q96HU1 749 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 PPANQ9NQ55 473 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 PLAAQ9Y263 795 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 SIK3Q9Y2K2 1263 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 COL5A2P05997 1499 aaPredicted RBP20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 GRID2IPA4D2P6 1211 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 MYCNP04198 464 aaPredicted RBP20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 SLC5A1P13866 664 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 GCFC2P16383 781 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 SCP2P22307 547 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 UBA7P41226 1012 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 CCDC47Q96A33 483 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 PLCH1Q4KWH8 1693 aa20.55■□□□□ 0.88
SFSWAP-207ENST00000538548 MYH3P11055 1940 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 PAPPAQ13219 1627 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 GMNCA6NCL1 334 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 SRBD1Q8N5C6 995 aaKnown RBP20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 CCSER1Q9C0I3 900 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 PLCB1Q9NQ66 1216 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 DDX20Q9UHI6 824 aaKnown RBP20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 EPHB6O15197 1021 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 HPDP32754 393 aaPredicted RBP20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 ANKRD13CQ8N6S4 541 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 OSBPL7Q9BZF2 842 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 MAGEF1Q9HAY2 307 aa20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 FAM207AQ9NSI2 230 aaPredicted RBP20.54■□□□□ 0.88
SFSWAP-207ENST00000538548 A0A0G2JS52 829 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 CDC37Q16543 378 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 PFKFB3Q16875 520 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 EP400NLQ6ZTU2 488 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 CCDC84Q86UT8 332 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 CEP57Q86XR8 500 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 HELBQ8NG08 1087 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 CUEDC2Q9H467 287 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 PP2D1A8MPX8 630 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 GCOM1H8Y6P7 765 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 TRAPPC3O43617 180 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 MYZAPP0CAP1 466 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 CALML3P27482 149 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 RASSF7Q02833 373 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 ASTE1Q2TB18 679 aaPredicted RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 ANKRD20A8PQ5CZ79 823 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 EIF1ADQ8N9N8 165 aaKnown RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 KRT12Q99456 494 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 SLC12A6Q9UHW9 1150 aa20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 BAZ2BQ9UIF8 2168 aaKnown RBP20.53■□□□□ 0.88
SFSWAP-207ENST00000538548 LRRC53A6NM62 1247 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 IRS4O14654 1257 aaPredicted RBP20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 BUB1O43683 1085 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 EZRP15311 586 aaKnown RBP20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 PDE4DQ08499 809 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 VWA3BQ502W6 1294 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 GIGYF2Q6Y7W6 1299 aaKnown RBP20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 SDR42E1Q8WUS8 393 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 TNS2Q63HR2 1409 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 DUOX1Q9NRD9 1551 aa20.52■□□□□ 0.88
SFSWAP-207ENST00000538548 ADAMTS3O15072 1205 aa20.52■□□□□ 0.87
SFSWAP-207ENST00000538548 NKRFO15226 690 aaKnown RBP eCLIP20.52■□□□□ 0.871e-6■□□□□ 10.8
SFSWAP-207ENST00000538548 IL2RBP14784 551 aa20.52■□□□□ 0.87
SFSWAP-207ENST00000538548 STK4Q13043 487 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms