RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 KBTBD4Q9NVX7 518 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 SYNRGQ9UMZ2 1314 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 HIRAP54198 1017 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-205ENST00000538545 RAD51AP2Q09MP3 1159 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 ARMCX5Q6P1M9 558 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 TRIML1Q8N9V2 468 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 POLD4Q9HCU8 107 aa15.9■□□□□ 0.14
ACTN1-205ENST00000538545 ATAD5Q96QE3 1844 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 USP27XA6NNY8 438 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 TEX33O43247 280 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 TBC1D12O60347 775 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 DDNO94850 711 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-205ENST00000538545 ASNSP08243 561 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 CDC25BP30305 580 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-205ENST00000538545 BTNL9Q6UXG8 535 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 ENOX1Q8TC92 643 aaKnown RBP15.89■□□□□ 0.13
ACTN1-205ENST00000538545 CCDC34Q96HJ3 373 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 ZNF18P17022 549 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 MTMR2Q13614 643 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 DNTTIP2Q5QJE6 756 aaKnown RBP15.89■□□□□ 0.13
ACTN1-205ENST00000538545 WNK4Q96J92 1243 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 PCDHA12Q9UN75 941 aa15.89■□□□□ 0.13
ACTN1-205ENST00000538545 R3HCC1Q9Y3T6 440 aaKnown RBP15.89■□□□□ 0.13
ACTN1-205ENST00000538545 SPDYE3A6NKU9 549 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 ASIC1P78348 528 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 GLIS3Q8NEA6 775 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 TRIM9Q9C026 710 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 GGA3Q9NZ52 723 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 NKRFO15226 690 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■□□□ 13.9
ACTN1-205ENST00000538545 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
ACTN1-205ENST00000538545 CCT6AP40227 531 aaKnown RBP15.88■□□□□ 0.13
ACTN1-205ENST00000538545 STK4Q13043 487 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 SPP2Q13103 211 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 PPP4R3AQ6IN85 833 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-205ENST00000538545 CENPFP49454 3210 aa15.88■□□□□ 0.13
ACTN1-205ENST00000538545 POTEB3A0JP26 581 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 MYMKA6NI61 221 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 POTECB2RU33 542 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 ERCC3P19447 782 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 POTEBQ6S5H4 581 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 NELFBQ8WX92 580 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 TRMT1Q9NXH9 659 aaKnown RBP15.87■□□□□ 0.13
ACTN1-205ENST00000538545 E9PMD0 336 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 MEIS1O00470 390 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 SKILP12757 684 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 CCZ1BP86790 482 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 CCZ1P86791 482 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-205ENST00000538545 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 CALML4Q96GE6 196 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 CDK5RAP3Q96JB5 506 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 AK8Q96MA6 479 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 PURBQ96QR8 312 aaKnown RBP15.87■□□□□ 0.13
ACTN1-205ENST00000538545 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
ACTN1-205ENST00000538545 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.131e-6■■■■□ 21.1
ACTN1-205ENST00000538545 TNFAIP1Q13829 316 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 ZNF658Q5TYW1 1059 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-205ENST00000538545 LDHDQ86WU2 507 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 LENG9Q96B70 501 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 WRNIP1Q96S55 665 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 SLC39A2Q9NP94 309 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 DACH1Q9UI36 760 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 NPHP3-ACAD11A0A0J9YXS1 232 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 NFIBO00712 420 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 IDEP14735 1019 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
ACTN1-205ENST00000538545 MAP3K10Q02779 954 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 CYP4A11Q02928 519 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 PDE4DQ08499 809 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 CRYGNQ8WXF5 182 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 H7C1D1 291 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 PEX10O60683 326 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 ERCC5P28715 1186 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-205ENST00000538545 TPD52L1Q16890 204 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-205ENST00000538545 APTXQ7Z2E3 356 aaKnown RBP15.86■□□□□ 0.13
ACTN1-205ENST00000538545 BCAS3Q9H6U6 928 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 RAVER2Q9HCJ3 691 aaKnown RBP15.86■□□□□ 0.13
ACTN1-205ENST00000538545 PKD2L1Q9P0L9 805 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 KIAA1024Q9UPX6 916 aa15.86■□□□□ 0.13
ACTN1-205ENST00000538545 POTEFA5A3E0 1075 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 OFD1O75665 1012 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 POTEIP0CG38 1075 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 SPATA1Q5VX52 437 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 KRT79Q5XKE5 535 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 NCAPH2Q6IBW4 605 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 POTEGQ6S5H5 508 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 POTEEQ6S8J3 1075 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 LARP4BQ92615 738 aaKnown RBP15.85■□□□□ 0.13
ACTN1-205ENST00000538545 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-205ENST00000538545 RANBP17Q9H2T7 1088 aaKnown RBP15.85■□□□□ 0.13
ACTN1-205ENST00000538545 TBC1D7Q9P0N9 293 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 MED24O75448 989 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 ZNF76P36508 570 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 ADKP55263 362 aaKnown RBP15.85■□□□□ 0.13
ACTN1-205ENST00000538545 PSMC6P62333 389 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 PAK1Q13153 545 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 LRRC41Q15345 812 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 CHURC1Q8WUH1 139 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 VPS16Q9H269 839 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms