RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 CCDC84Q86UT8 332 aaPredicted RBP6.84□□□□□ -1.31
SP140-212ENST00000538494 PI4KAP1Q8N8J0 262 aa6.84□□□□□ -1.31
SP140-212ENST00000538494 C1orf216Q8TAB5 229 aa6.84□□□□□ -1.31
SP140-212ENST00000538494 FERMT2Q96AC1 680 aa6.84□□□□□ -1.31
SP140-212ENST00000538494 VWCEQ96DN2 955 aa6.84□□□□□ -1.31
SP140-212ENST00000538494 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.84□□□□□ -1.31
SP140-212ENST00000538494 LRRFIP2Q9Y608 721 aaKnown RBP6.84□□□□□ -1.31
SP140-212ENST00000538494 NDUFB9Q9Y6M9 179 aa6.84□□□□□ -1.31
SP140-212ENST00000538494 DOCK2Q92608 1830 aa6.84□□□□□ -1.31
SP140-212ENST00000538494 KIF16BQ96L93 1317 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 A0A1W2PQ45 241 aaPredicted RBP6.83□□□□□ -1.32
SP140-212ENST00000538494 A0A1W2PQY0 241 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 DDTLA6NHG4 134 aaPredicted RBP6.83□□□□□ -1.32
SP140-212ENST00000538494 DCDC2CA8MYV0 355 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 CNMDO75829 334 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 GLRX3O76003 335 aaKnown RBP6.83□□□□□ -1.32
SP140-212ENST00000538494 CNGA1P29973 690 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 BACE1P56817 501 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 ATP2B2Q01814 1243 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 FLIIQ13045 1269 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 MCM6Q14566 821 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 EPHA10Q5JZY3 1008 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 CCSAPQ6IQ19 270 aaPredicted RBP6.83□□□□□ -1.32
SP140-212ENST00000538494 LBX2Q6XYB7 198 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 LDHAL6AQ6ZMR3 332 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 TMEM199Q8N511 208 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 IL23AQ9NPF7 189 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 NRBP1Q9UHY1 535 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 RABGAP1Q9Y3P9 1069 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 FRYLO94915 3013 aa6.83□□□□□ -1.32
SP140-212ENST00000538494 ROBO3Q96MS0 1386 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 C19orf81C9J6K1 198 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 RFXAPO00287 272 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 PQBP1O60828 265 aaKnown RBP6.82□□□□□ -1.32
SP140-212ENST00000538494 FGBP02675 491 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 ALAS2P22557 587 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 ID4P47928 161 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 IRX3P78415 501 aaPredicted RBP6.82□□□□□ -1.32
SP140-212ENST00000538494 USP4Q13107 963 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 HERC4Q5GLZ8 1057 aaPredicted RBP6.82□□□□□ -1.32
SP140-212ENST00000538494 FAM47AQ5JRC9 791 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 ZNF468Q5VIY5 522 aaPredicted RBP6.82□□□□□ -1.32
SP140-212ENST00000538494 KRT40Q6A162 431 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 MICALL1Q8N3F8 863 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 NIFKQ9BYG3 293 aaKnown RBP6.82□□□□□ -1.32
SP140-212ENST00000538494 IRF2BPLQ9H1B7 796 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 MTIF3Q9H2K0 278 aaKnown RBP6.82□□□□□ -1.32
SP140-212ENST00000538494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.82□□□□□ -1.32
SP140-212ENST00000538494 USP40Q9NVE5 1235 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 PRKAG3Q9UGI9 489 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 ZNF236Q9UL36 1845 aa6.82□□□□□ -1.32
SP140-212ENST00000538494 EP300Q09472 2414 aaPredicted RBP6.81□□□□□ -1.32
SP140-212ENST00000538494 MAPK8IP3Q9UPT6 1336 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 STRNO43815 780 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 ADAMTS4O75173 837 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 CD4P01730 458 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 ACRP10323 421 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 MYOGP15173 224 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 CAP2P40123 477 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 RGS3P49796 1198 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 RABGGTBP53611 331 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 NEXNQ0ZGT2 675 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 RRP1BQ14684 758 aaKnown RBP6.81□□□□□ -1.32
SP140-212ENST00000538494 VGLL2Q8N8G2 317 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 KLHDC9Q8NEP7 349 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 NEK9Q8TD19 979 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 CHMP4AQ9BY43 222 aa6.81□□□□□ -1.32
SP140-212ENST00000538494 UBE2ZQ9H832 354 aaPredicted RBP6.81□□□□□ -1.32
SP140-212ENST00000538494 ELP1O95163 1332 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 MROH7Q68CQ1 1323 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 ELOA3CA0A087WX78 387 aaPredicted RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 MED19A0JLT2 244 aaPredicted RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 ELOA3DA6NLF2 546 aaPredicted RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 IL9P15248 144 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 MAP1BP46821 2468 aaKnown RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 CCNA1P78396 465 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 TAP1Q03518 808 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 ZP2Q05996 745 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 CHAF1AQ13111 956 aaPredicted RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 GRB10Q13322 594 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 COL19A1Q14993 1142 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 ELOA3BQ3SY89 546 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 ASCL5Q7RTU5 278 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 RNF180Q86T96 592 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 ELOA3Q8NG57 546 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 WDR66Q8TBY9 1149 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 KRTAP9-9Q9BYP9 154 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 DDX4Q9NQI0 724 aaKnown RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 MARK1Q9P0L2 795 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 IQSEC3Q9UPP2 1182 aaPredicted RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 DOLKQ9UPQ8 538 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 USP24Q9UPU5 2620 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 FAM208BQ5VWN6 2430 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 SETXQ7Z333 2677 aaKnown RBP6.8□□□□□ -1.32
SP140-212ENST00000538494 GPR179Q6PRD1 2367 aa6.8□□□□□ -1.32
SP140-212ENST00000538494 SALL1Q9NSC2 1324 aa6.79□□□□□ -1.32
SP140-212ENST00000538494 KMT2EQ8IZD2 1858 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms