RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
CDH20-203ENST00000538374 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 ZNF263O14978 683 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 RASA1P20936 1047 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
CDH20-203ENST00000538374 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 GIMAP8Q8ND71 665 aaPredicted RBP17.21■□□□□ 0.35
CDH20-203ENST00000538374 CNOT6LQ96LI5 555 aaKnown RBP17.21■□□□□ 0.35
CDH20-203ENST00000538374 NHEJ1Q9H9Q4 299 aaPredicted RBP17.21■□□□□ 0.35
CDH20-203ENST00000538374 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
CDH20-203ENST00000538374 PSMA7O14818 248 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 PLCG2P16885 1265 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 TNNT3P45378 269 aaPredicted RBP17.21■□□□□ 0.35
CDH20-203ENST00000538374 FAM193AP78312 1265 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 RAD51AP2Q09MP3 1159 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 GRM4Q14833 912 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 LRRC41Q15345 812 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
CDH20-203ENST00000538374 FAM207AQ9NSI2 230 aaPredicted RBP17.21■□□□□ 0.35
CDH20-203ENST00000538374 FRMPD2Q68DX3 1309 aaPredicted RBP17.2■□□□□ 0.34
CDH20-203ENST00000538374 SMCO2A6NFE2 343 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 CXCR5P32302 372 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 MATR3P43243 847 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDH20-203ENST00000538374 TRAPPC11Q7Z392 1133 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 JAKMIP2Q96AA8 810 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 PIGSQ96S52 555 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 DNAJC7Q99615 494 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 BARHL2Q9NY43 387 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 CAPN11Q9UMQ6 739 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
CDH20-203ENST00000538374 C2orf54Q08AI8 447 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 NOC4LQ9BVI4 516 aaKnown RBP17.2■□□□□ 0.34
CDH20-203ENST00000538374 TRIM9Q9C026 710 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
CDH20-203ENST00000538374 TRIM66O15016 1216 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 WHAMMP3Q1A5X7 153 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 TSR1Q2NL82 804 aaKnown RBP17.19■□□□□ 0.34
CDH20-203ENST00000538374 KIAA0895Q8NCT3 520 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 COA7Q96BR5 231 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 MMTAG2Q9BU76 263 aaKnown RBP17.19■□□□□ 0.34
CDH20-203ENST00000538374 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 ZC3H12CQ9C0D7 883 aaKnown RBP17.19■□□□□ 0.34
CDH20-203ENST00000538374 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 JADE2Q9NQC1 790 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 EXOC1Q9NV70 894 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 SAR1BQ9Y6B6 198 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 MYH10P35580 1976 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 MIIPQ5JXC2 388 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 TBCKQ8TEA7 893 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 HDAC7Q8WUI4 952 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 C7orf43Q8WVR3 580 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 SEMA6BQ9H3T3 888 aa17.19■□□□□ 0.34
CDH20-203ENST00000538374 HNRNPLLQ8WVV9 542 aaKnown RBP17.18■□□□□ 0.34
CDH20-203ENST00000538374 P2RX5Q93086 422 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 C10orf71Q711Q0 1435 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 VGLL3A8MV65 326 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 ERLIN1O75477 346 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 NOVP48745 357 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 DNA2P51530 1060 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 APBA1Q02410 837 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 TAF3Q5VWG9 929 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 RABEP2Q9H5N1 569 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
CDH20-203ENST00000538374 POTEMA6NI47 508 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 USP17L5A8MUK1 530 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 CDK8P49336 464 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 STIM1Q13586 685 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 TXLNBQ8N3L3 684 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDH20-203ENST00000538374 TTYH3Q9C0H2 523 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
CDH20-203ENST00000538374 OR52Z1P0C646 297 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 IDEP14735 1019 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 TRIM14Q14142 442 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 THAP9Q9H5L6 903 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 HAUS4Q9H6D7 363 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 TMEM51Q9NW97 253 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 CAPN6Q9Y6Q1 641 aa17.17■□□□□ 0.34
CDH20-203ENST00000538374 TDP2O95551 362 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 EEF1GP26641 437 aaKnown RBP17.16■□□□□ 0.34
CDH20-203ENST00000538374 CHRNA5P30532 468 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 DNM2P50570 870 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 SLC7A5Q01650 507 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 GPS2Q13227 327 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 AMOTL1Q8IY63 956 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 CCDC148Q8NFR7 591 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 CCSER1Q9C0I3 900 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 MMRN2Q9H8L6 949 aa17.16■□□□□ 0.34
CDH20-203ENST00000538374 DDX4Q9NQI0 724 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms