RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 GPNMBQ14956 572 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 GIMAP6Q6P9H5 292 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 POTEBQ6S5H4 581 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 HFE2Q6ZVN8 426 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 LRRC8DQ7L1W4 858 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 NEDD1Q8NHV4 660 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 NEK9Q8TD19 979 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 C17orf80Q9BSJ5 609 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 C5orf42Q9H799 3197 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 TRIOO75962 3097 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 LCTP09848 1927 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 RBM47A0AV96 593 aaKnown RBP13.22□□□□□ -0.29
CLPB-208ENST00000538021 NKRFO15226 690 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLPB-208ENST00000538021 CALML3P27482 149 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 MFSD14AQ96MC6 490 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 EPB41L4AQ9HCS5 686 aaPredicted RBP13.22□□□□□ -0.29
CLPB-208ENST00000538021 CTNNA3Q9UI47 895 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 STX8Q9UNK0 236 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 FAM50BQ9Y247 325 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 SIP14410 1827 aa13.22□□□□□ -0.29
CLPB-208ENST00000538021 A6NJR5 290 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 RBAK-RBAKDNI3L0D1 243 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 PLA2G6O60733 806 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 NBNO60934 754 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 ICAM1P05362 532 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 TXNP10599 105 aaKnown RBP13.21□□□□□ -0.29
CLPB-208ENST00000538021 ZP2Q05996 745 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 PDE4BQ07343 736 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 PDE4DQ08499 809 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 IKBKEQ14164 716 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 PTPROQ16827 1216 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 TCTN1Q2MV58 587 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 GDF6Q6KF10 455 aaPredicted RBP13.21□□□□□ -0.29
CLPB-208ENST00000538021 RASGRP2Q7LDG7 609 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
CLPB-208ENST00000538021 MRPL38Q96DV4 380 aaKnown RBP13.21□□□□□ -0.29
CLPB-208ENST00000538021 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
CLPB-208ENST00000538021 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 NFIBO00712 420 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 EFCAB14O75071 495 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 HMMRO75330 724 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 PARNO95453 639 aaKnown RBP13.2□□□□□ -0.3
CLPB-208ENST00000538021 CXCL10P02778 98 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 CCDC96Q2M329 555 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 TIGD5Q53EQ6 642 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 SLC30A10Q6XR72 485 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
CLPB-208ENST00000538021 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 MPHOSPH6Q99547 160 aaKnown RBP13.2□□□□□ -0.3
CLPB-208ENST00000538021 PRKAG3Q9UGI9 489 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 INSL6Q9Y581 213 aa13.2□□□□□ -0.3
CLPB-208ENST00000538021 CFAP54Q96N23 3096 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 LOC102724159A0A0B4J2E5 919 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 GPAA1O43292 621 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
CLPB-208ENST00000538021 CKBP12277 381 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 GNAT2P19087 354 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 PWP2Q15269 919 aaKnown RBP13.19□□□□□ -0.3
CLPB-208ENST00000538021 TCEAL5Q5H9L2 206 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLPB-208ENST00000538021 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 MYOCDQ8IZQ8 938 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 APPBP2Q92624 585 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 PABPC5Q96DU9 382 aaKnown RBP13.19□□□□□ -0.3
CLPB-208ENST00000538021 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
CLPB-208ENST00000538021 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
CLPB-208ENST00000538021 IRS1P35568 1242 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 SLC16A2P36021 539 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 GPM6BQ13491 265 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 EPC2Q52LR7 807 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 TTBK2Q6IQ55 1244 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 AFG1LQ8WV93 481 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
CLPB-208ENST00000538021 MUTYHQ9UIF7 546 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
CLPB-208ENST00000538021 TSPY2A6NKD2 308 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 M0R2C6 588 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
CLPB-208ENST00000538021 ST18O60284 1047 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 NMT2O60551 498 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 ARIH2O95376 493 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 AMHP03971 560 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 MMP3P08254 477 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 CLUL1Q15846 466 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 CHST3Q7LGC8 479 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 SESTD1Q86VW0 696 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms