RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 BAATQ14032 418 aaPredicted RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 UVSSAQ2YD98 709 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 SLC30A10Q6XR72 485 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 RNF207Q6ZRF8 634 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 TRPV1Q8NER1 839 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 RRP36Q96EU6 259 aaKnown RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 SYNGAP1Q96PV0 1343 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
SNHG1-206ENST00000537925 PCDHA1Q9Y5I3 950 aa13.23□□□□□ -0.29
SNHG1-206ENST00000537925 SGPL1O95470 568 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 SYT1P21579 422 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
SNHG1-206ENST00000537925 GJA8P48165 433 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 NOL8Q76FK4 1167 aaKnown RBP13.22□□□□□ -0.29
SNHG1-206ENST00000537925 MCF2L2Q86YR7 1114 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 CCDC82Q8N4S0 544 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 ZNF274Q96GC6 653 aaPredicted RBP13.22□□□□□ -0.29
SNHG1-206ENST00000537925 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 NRBP1Q9UHY1 535 aa13.22□□□□□ -0.29
SNHG1-206ENST00000537925 NAP1L2Q9ULW6 460 aaPredicted RBP13.22□□□□□ -0.29
SNHG1-206ENST00000537925 MYH7BA7E2Y1 1941 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 LOC102724159A0A0B4J2E5 919 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 CCDC196A0A1B0GTZ2 297 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 SYCE3A1L190 88 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 SNAI1O95863 264 aaPredicted RBP13.21□□□□□ -0.3
SNHG1-206ENST00000537925 EN2P19622 333 aaPredicted RBP13.21□□□□□ -0.3
SNHG1-206ENST00000537925 PDCP20941 246 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 PWP2Q15269 919 aaKnown RBP13.21□□□□□ -0.3
SNHG1-206ENST00000537925 CCDC183Q5T5S1 534 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 SAMD3Q8N6K7 520 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.3
SNHG1-206ENST00000537925 DEFB118Q96PH6 123 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 PURBQ96QR8 312 aaKnown RBP13.21□□□□□ -0.3
SNHG1-206ENST00000537925 CRISPLD2Q9H0B8 497 aa13.21□□□□□ -0.3
SNHG1-206ENST00000537925 SEC63Q9UGP8 760 aaKnown RBP13.21□□□□□ -0.3
SNHG1-206ENST00000537925 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 CAPN2P17655 700 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 CALML3P27482 149 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 HSD17B4P51659 736 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 NTRK3Q16288 839 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 PRAMEF19Q5SWL8 479 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 LHX8Q68G74 356 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 DNERQ8NFT8 737 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 KATNBL1Q9H079 304 aa13.2□□□□□ -0.3
SNHG1-206ENST00000537925 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.2□□□□□ -0.3
SNHG1-206ENST00000537925 MAP3K20Q9NYL2 800 aaKnown RBP13.2□□□□□ -0.3
SNHG1-206ENST00000537925 ADD3Q9UEY8 706 aaKnown RBP13.2□□□□□ -0.3
SNHG1-206ENST00000537925 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
SNHG1-206ENST00000537925 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 ASB14A6NK59 587 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 SEPT4O43236 478 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 CFBP00751 764 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 ZNF865P0CJ78 1059 aaPredicted RBP13.19□□□□□ -0.3
SNHG1-206ENST00000537925 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
SNHG1-206ENST00000537925 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
SNHG1-206ENST00000537925 HABP4Q5JVS0 413 aaKnown RBP13.19□□□□□ -0.3
SNHG1-206ENST00000537925 ARMCX2Q7L311 632 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
SNHG1-206ENST00000537925 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
SNHG1-206ENST00000537925 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
SNHG1-206ENST00000537925 MTMR6Q9Y217 621 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 CNPY2Q9Y2B0 182 aa13.19□□□□□ -0.3
SNHG1-206ENST00000537925 ELP1O95163 1332 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 MSCO60682 206 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 IFNAR1P17181 557 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 GJB2P29033 226 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 CNGA1P29973 690 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 TERF1P54274 439 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 NCOA5Q9HCD5 579 aaKnown RBP13.18□□□□□ -0.3
SNHG1-206ENST00000537925 OGDHLQ9ULD0 1010 aa13.18□□□□□ -0.3
SNHG1-206ENST00000537925 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
SNHG1-206ENST00000537925 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
SNHG1-206ENST00000537925 LARGE1O95461 756 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 TFRCP02786 760 aaKnown RBP13.17□□□□□ -0.3
SNHG1-206ENST00000537925 EDNRBP24530 442 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 MSNP26038 577 aaKnown RBP13.17□□□□□ -0.3
SNHG1-206ENST00000537925 ST3GAL1Q11201 340 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 ACVR2BQ13705 512 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 ME3Q16798 604 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 FOXD4L5Q5VV16 416 aaPredicted RBP13.17□□□□□ -0.3
SNHG1-206ENST00000537925 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 FOXD4L4Q8WXT5 416 aaPredicted RBP13.17□□□□□ -0.3
SNHG1-206ENST00000537925 TAAR1Q96RJ0 339 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
SNHG1-206ENST00000537925 GCOM1H8Y6P7 765 aaPredicted RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 hCG_1984214I3L0E3 225 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 POLR2MP0CAP2 368 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 ZNF713Q8N859 430 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms