RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
LDHA-215ENST00000537296 SPZ1Q9BXG8 430 aa12.57□□□□□ -0.4
LDHA-215ENST00000537296 ADD3Q9UEY8 706 aaKnown RBP12.57□□□□□ -0.4
LDHA-215ENST00000537296 ZMYND8Q9ULU4 1186 aaPredicted RBP12.57□□□□□ -0.4
LDHA-215ENST00000537296 STK24Q9Y6E0 443 aa12.57□□□□□ -0.4
LDHA-215ENST00000537296 KLF18A0A0U1RQI7 1052 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 C6orf222P0C671 652 aaPredicted RBP12.56□□□□□ -0.4
LDHA-215ENST00000537296 SYN1P17600 705 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
LDHA-215ENST00000537296 KIF5BP33176 963 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 HSD17B4P51659 736 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 BEX3Q00994 111 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
LDHA-215ENST00000537296 BLOC1S2Q6QNY1 142 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 TMTC3Q6ZXV5 915 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 KLHDC9Q8NEP7 349 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
LDHA-215ENST00000537296 PHF24Q9UPV7 400 aa12.56□□□□□ -0.4
LDHA-215ENST00000537296 GNEQ9Y223 722 aaKnown RBP12.56□□□□□ -0.4
LDHA-215ENST00000537296 CALM1P0DP23 149 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 CALM2P0DP24 149 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 CALM3P0DP25 149 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 EIF2AK2P19525 551 aaKnown RBP12.55□□□□□ -0.4
LDHA-215ENST00000537296 RPS6KB1P23443 525 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 CDC27P30260 824 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 GHRHRQ02643 423 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 PDE4DQ08499 809 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 KCNA10Q16322 511 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
LDHA-215ENST00000537296 RNF180Q86T96 592 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 BRF1Q92994 677 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 RRP36Q96EU6 259 aaKnown RBP12.55□□□□□ -0.4
LDHA-215ENST00000537296 RMDN3Q96TC7 470 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 UPF3AQ9H1J1 476 aaKnown RBP12.55□□□□□ -0.4
LDHA-215ENST00000537296 VTA1Q9NP79 307 aa12.55□□□□□ -0.4
LDHA-215ENST00000537296 LAMA3Q16787 3333 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 A0A1W2PQ45 241 aaPredicted RBP12.54□□□□□ -0.4
LDHA-215ENST00000537296 A0A1W2PQY0 241 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 ZBTB43O43298 467 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 ARIH2O95376 493 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 SEC24BO95487 1268 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 HMGB1P09429 215 aaKnown RBP12.54□□□□□ -0.4
LDHA-215ENST00000537296 ACLYP53396 1101 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 GJA9P57773 515 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 FUT2Q10981 343 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 TLK2Q86UE8 772 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 IL31RAQ8NI17 732 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 COPS5Q92905 334 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
LDHA-215ENST00000537296 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
LDHA-215ENST00000537296 PXMP2Q9NR77 195 aa12.54□□□□□ -0.4
LDHA-215ENST00000537296 NAP1L2Q9ULW6 460 aaPredicted RBP12.54□□□□□ -0.4
LDHA-215ENST00000537296 GOLGA8AA7E2F4 631 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 GOLGA8BA8MQT2 603 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 DYNC1LI2O43237 492 aaPredicted RBP12.53□□□□□ -0.4
LDHA-215ENST00000537296 ASGR1P07306 291 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 GNAQP50148 359 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 RTP1P59025 263 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 RTN1Q16799 776 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 TRIM60Q495X7 471 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 GNASQ5JWF2 1037 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 FCHSD1Q86WN1 690 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 NSUN6Q8TEA1 469 aaKnown RBP12.53□□□□□ -0.4
LDHA-215ENST00000537296 GPKOWQ92917 476 aaPredicted RBP eCLIP12.53□□□□□ -0.45e-7■■■■□ 22.3
LDHA-215ENST00000537296 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 WDR11Q9BZH6 1224 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
LDHA-215ENST00000537296 ATP11BQ9Y2G3 1177 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 MYH7BA7E2Y1 1941 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
LDHA-215ENST00000537296 DOCK5Q9H7D0 1870 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.4
LDHA-215ENST00000537296 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.4
LDHA-215ENST00000537296 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.4
LDHA-215ENST00000537296 CST5P28325 142 aaPredicted RBP12.52□□□□□ -0.4
LDHA-215ENST00000537296 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.4
LDHA-215ENST00000537296 FGD1P98174 961 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.4
LDHA-215ENST00000537296 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 IQSEC1Q6DN90 963 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 RUFY3Q7L099 469 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.4
LDHA-215ENST00000537296 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.4
LDHA-215ENST00000537296 LOC102724159A0A0B4J2E5 919 aa12.52□□□□□ -0.41
LDHA-215ENST00000537296 GCOM1H8Y6P7 765 aaPredicted RBP12.52□□□□□ -0.41
LDHA-215ENST00000537296 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
LDHA-215ENST00000537296 RGS20O76081 388 aa12.52□□□□□ -0.41
LDHA-215ENST00000537296 NR3C2P08235 984 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 438 ms