RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MIGA1Q8NAN2 632 aa11.59□□□□□ -0.55
CPSF7-217ENST00000537162 NEUROD6Q96NK8 337 aa11.59□□□□□ -0.55
CPSF7-217ENST00000537162 MTG1Q9BT17 334 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-217ENST00000537162 Q9Y3F1 56 aa11.59□□□□□ -0.55
CPSF7-217ENST00000537162 MYH8P13535 1937 aa11.58□□□□□ -0.55
CPSF7-217ENST00000537162 ZFYVE26Q68DK2 2539 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 RBM10P98175 930 aaKnown RBP11.58□□□□□ -0.56
CPSF7-217ENST00000537162 PTGISQ16647 500 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 IQSEC1Q6DN90 963 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 NFRKBQ6P4R8 1299 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPSF7-217ENST00000537162 TTC6Q86TZ1 520 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
CPSF7-217ENST00000537162 RAVER2Q9HCJ3 691 aaKnown RBP11.58□□□□□ -0.56
CPSF7-217ENST00000537162 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 NOD1Q9Y239 953 aa11.58□□□□□ -0.56
CPSF7-217ENST00000537162 MYO10Q9HD67 2058 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 CKBP12277 381 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 AKR1B1P15121 316 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 CTNNB1P35222 781 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 CHMP4BP1P59074 171 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 ICA1Q05084 483 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 GDF6Q6KF10 455 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-217ENST00000537162 TMEM179Q6ZVK1 233 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 CCDC105Q8IYK2 499 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 SUSD6Q92537 303 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 YME1L1Q96TA2 773 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 ARHGEF10LQ9HCE6 1279 aa11.57□□□□□ -0.56
CPSF7-217ENST00000537162 UPP2O95045 317 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 AMHP03971 560 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 CYP2E1P05181 493 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-217ENST00000537162 DNAJB1P25685 340 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 CLCN5P51795 746 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 KIAA1211Q6ZU35 1233 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 EFHBQ8N7U6 833 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 RUBCNQ92622 972 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 WNT8BQ93098 351 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 HAUS7Q99871 368 aa11.56□□□□□ -0.56
CPSF7-217ENST00000537162 PIH1D3Q9NQM4 214 aaKnown RBP11.56□□□□□ -0.56
CPSF7-217ENST00000537162 C5orf67F2Z3F1 127 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 RAD21O60216 631 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 EFCAB14O75071 495 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 CYP2D6P10635 497 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 EEF2P13639 858 aaKnown RBP11.55□□□□□ -0.56
CPSF7-217ENST00000537162 CYP7A1P22680 504 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 DUSP28Q4G0W2 176 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 DTWD2Q8NBA8 298 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 FLCNQ8NFG4 579 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 DBF4BQ8NFT6 615 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 DYNLL2Q96FJ2 89 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 PURBQ96QR8 312 aaKnown RBP11.55□□□□□ -0.56
CPSF7-217ENST00000537162 SLF1Q9BQI6 1058 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 LMAN2LQ9H0V9 348 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 SEMA4AQ9H3S1 761 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 HOMER2Q9NSB8 354 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 FANCMQ8IYD8 2048 aa11.55□□□□□ -0.56
CPSF7-217ENST00000537162 ASH1LQ9NR48 2969 aaKnown RBP11.55□□□□□ -0.56
CPSF7-217ENST00000537162 KIAA1671Q9BY89 1806 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 CYSRT1A8MQ03 144 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 ATP2A1O14983 1001 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 NPR3P17342 541 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 ATF7P17544 494 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-217ENST00000537162 NRIP1P48552 1158 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 PTPN11Q06124 597 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-217ENST00000537162 RBL2Q08999 1139 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 MTMR3Q13615 1198 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 GORABQ5T7V8 394 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 ZNF618Q5T7W0 954 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 RBM23Q86U06 439 aaKnown RBP11.54□□□□□ -0.56
CPSF7-217ENST00000537162 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 VN1R2Q8NFZ6 395 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 TOP1MTQ969P6 601 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 OSBPL7Q9BZF2 842 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 MFSD1Q9H3U5 465 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 COPRSQ9NQ92 184 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
CPSF7-217ENST00000537162 SORCS3Q9UPU3 1222 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 IL16Q14005 1332 aa11.54□□□□□ -0.56
CPSF7-217ENST00000537162 ASB14A6NK59 587 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 SOBPA7XYQ1 873 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 MMP1P03956 469 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 POLR3DP05423 398 aaPredicted RBP11.53□□□□□ -0.56
CPSF7-217ENST00000537162 BMPR1AP36894 532 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 TRIM71Q2Q1W2 868 aaKnown RBP11.53□□□□□ -0.56
CPSF7-217ENST00000537162 UBALD2Q8IYN6 164 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 OR6J1Q8NGC5 347 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 RIN2Q8WYP3 895 aaPredicted RBP11.53□□□□□ -0.56
CPSF7-217ENST00000537162 C11orf84Q9BUA3 381 aaPredicted RBP11.53□□□□□ -0.56
CPSF7-217ENST00000537162 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 A1CFQ9NQ94 594 aaKnown RBP11.53□□□□□ -0.56
CPSF7-217ENST00000537162 CDH22Q9UJ99 828 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 AKAP2Q9Y2D5 859 aa11.53□□□□□ -0.56
CPSF7-217ENST00000537162 NBEAQ8NFP9 2946 aa11.52□□□□□ -0.57
CPSF7-217ENST00000537162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-217ENST00000537162 AOC1P19801 751 aa11.52□□□□□ -0.57
CPSF7-217ENST00000537162 CPT1AP50416 773 aa11.52□□□□□ -0.57
CPSF7-217ENST00000537162 SUMF1Q8NBK3 374 aa11.52□□□□□ -0.57
CPSF7-217ENST00000537162 CHST13Q8NET6 341 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms