RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ATAD5Q96QE3 1844 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 POTEMA6NI47 508 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 RNF225M0QZC1 329 aaPredicted RBP10.43□□□□□ -0.74
UBE3B-207ENST00000537063 SLC1A4P43007 532 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 JAG1P78504 1218 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 MTF1Q14872 753 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 CENPPQ6IPU0 288 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 GMLQ99445 158 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 PSMD1Q99460 953 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 DNAJC7Q99615 494 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 TTYH3Q9C0H2 523 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 VPS16Q9H269 839 aa10.43□□□□□ -0.74
UBE3B-207ENST00000537063 MRPL44Q9H9J2 332 aaKnown RBP10.43□□□□□ -0.74
UBE3B-207ENST00000537063 MEIS2O14770 477 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 CCDC175P0C221 793 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 RRP1BQ14684 758 aaKnown RBP10.42□□□□□ -0.74
UBE3B-207ENST00000537063 ABCB5Q2M3G0 1257 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 CCDC94Q9BW85 323 aaPredicted RBP10.42□□□□□ -0.74
UBE3B-207ENST00000537063 DNAI1Q9UI46 699 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 FCER1AP12319 257 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 ANKRD40Q6AI12 368 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 TMTC1Q8IUR5 882 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 PDCL2Q8N4E4 241 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 NUDT12Q9BQG2 462 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 SRRTQ9BXP5 876 aaKnown RBP10.42□□□□□ -0.74
UBE3B-207ENST00000537063 LRRC27Q9C0I9 530 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 TDRD3Q9H7E2 651 aaKnown RBP10.42□□□□□ -0.74
UBE3B-207ENST00000537063 HERC5Q9UII4 1024 aaKnown RBP10.42□□□□□ -0.74
UBE3B-207ENST00000537063 ABCB11O95342 1321 aa10.42□□□□□ -0.74
UBE3B-207ENST00000537063 F5H6K3 240 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 NDUFB10O96000 172 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 RBM5P52756 815 aaKnown RBP eCLIP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 ERVK-24P63145 666 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 ATP2B2Q01814 1243 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 KLRC3Q07444 240 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 MCM6Q14566 821 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 NAA30Q147X3 362 aaPredicted RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 KRT79Q5XKE5 535 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 KCNK18Q7Z418 384 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 SNX29Q8TEQ0 813 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 PRMT6Q96LA8 375 aaPredicted RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 ANO3Q9BYT9 981 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 SEMA6BQ9H3T3 888 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 STK32BQ9NY57 414 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 CGNQ9P2M7 1197 aaKnown RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 PCDHA1Q9Y5I3 950 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 BRCA1P38398 1863 aaKnown RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 SPDYE2BA6NHP3 402 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 TPM1P09493 284 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 SPDYE6P0CI01 402 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 EZH2Q15910 746 aaKnown RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 ECM1Q16610 540 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 MIIPQ5JXC2 388 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 FAM114A1Q8IWE2 563 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 P2RX7Q99572 595 aaKnown RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 DESI2Q9BSY9 194 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 KDM3AQ9Y4C1 1321 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 CNTNAP1P78357 1384 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 VIL1P09327 827 aaKnown RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 DNM2P50570 870 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 UBXN1Q04323 297 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 PSMD2Q13200 908 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 Q4G0T1 1027 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 RSBN1LQ6PCB5 846 aaPredicted RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 GUF1Q8N442 669 aaKnown RBP10.41□□□□□ -0.74
UBE3B-207ENST00000537063 CSGALNACT2Q8N6G5 542 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 DNAJC19Q96DA6 116 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 WDR24Q96S15 920 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 CAPN11Q9UMQ6 739 aa10.41□□□□□ -0.74
UBE3B-207ENST00000537063 TBX3O15119 743 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 PPIP5K2O43314 1243 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 SPIRE1Q08AE8 756 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 SYDE2Q5VT97 1194 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 CYP26C1Q6V0L0 522 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 ETNPPLQ8TBG4 499 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 AMNQ9BXJ7 453 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 VPS33BQ9H267 617 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L15C9J2P7 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L13C9JLJ4 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L11C9JVI0 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L18D6R9N7 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L22D6RA61 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L17D6RBQ6 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L19D6RCP7 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L20D6RJB6 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 OPLAHO14841 1288 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 GDF11O95390 407 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 MAP3K9P80192 1104 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L24Q0WX57 530 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 MEA1Q16626 185 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 USP17L6PQ6QN14 398 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 RETREG2Q8NC44 543 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 CDK5RAP3Q96JB5 506 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 ERGIC2Q96RQ1 377 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.74
UBE3B-207ENST00000537063 RASSF10A6NK89 507 aa10.4□□□□□ -0.75
UBE3B-207ENST00000537063 PIK3CDO00329 1044 aa10.4□□□□□ -0.75
UBE3B-207ENST00000537063 SREBF1P36956 1147 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms