RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 BARHL2Q9NY43 387 aa13.43□□□□□ -0.26
PTCD2-211ENST00000536805 SSU72P8A0A1W2PR75 194 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 STXBP3O00186 592 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 AKR1B10O60218 316 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
PTCD2-211ENST00000536805 EMC10Q5UCC4 262 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 MCTP2Q6DN12 878 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 FOXR2Q6PJQ5 311 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 IFT20Q8IY31 132 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 MREGQ8N565 214 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 C1orf131Q8NDD1 294 aaKnown RBP13.42□□□□□ -0.26
PTCD2-211ENST00000536805 CEP89Q96ST8 783 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 PLIN2Q99541 437 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 PAGR1Q9BTK6 254 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 NDST4Q9H3R1 872 aa13.42□□□□□ -0.26
PTCD2-211ENST00000536805 FCER1AP12319 257 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 USP8P40818 1118 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 MAGEA1P43355 309 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 ASTE1Q2TB18 679 aaPredicted RBP13.41□□□□□ -0.26
PTCD2-211ENST00000536805 INTS5Q6P9B9 1019 aaKnown RBP13.41□□□□□ -0.26
PTCD2-211ENST00000536805 KDM7AQ6ZMT4 941 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 KRT25Q7Z3Z0 450 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 CD302Q8IX05 232 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 KIAA0895Q8NCT3 520 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 FAM84BQ96KN1 310 aaPredicted RBP13.41□□□□□ -0.26
PTCD2-211ENST00000536805 NOX5Q96PH1 765 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 SEMA6BQ9H3T3 888 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 GDF3Q9NR23 364 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 ROBO3Q96MS0 1386 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 GRID2IPA4D2P6 1211 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 RBAK-RBAKDNI3L0D1 243 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 INPP5BP32019 993 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 LIG3P49916 1009 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 MECOMQ03112 1051 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 EVX2Q03828 476 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 PAK2Q13177 524 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 CFAP221Q4G0U5 840 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 PDXDC1Q6P996 788 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 BAP1Q92560 729 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 ARL8AQ96BM9 186 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 DRC1Q96MC2 740 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 LZTS2Q9BRK4 669 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 TLR10Q9BXR5 811 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
PTCD2-211ENST00000536805 GEMIN8Q9NWZ8 242 aaKnown RBP13.41□□□□□ -0.26
PTCD2-211ENST00000536805 MAD2L2Q9UI95 211 aa13.41□□□□□ -0.26
PTCD2-211ENST00000536805 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 CCDC88AQ3V6T2 1871 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 PVALEFA0A1B0GWK0 134 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 LRRC53A6NM62 1247 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 SRRM3A6NNA2 597 aaPredicted RBP13.4□□□□□ -0.26
PTCD2-211ENST00000536805 EPHB6O15197 1021 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 CYP2D6P10635 497 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 SLC7A5Q01650 507 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 LRRC63Q05C16 580 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 FBXO33Q7Z6M2 555 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 CNPY4Q8N129 248 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 STAG2Q8N3U4 1231 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 KAT2BQ92831 832 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 ZIM3Q96PE6 472 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 NUCKS1Q9H1E3 243 aaKnown RBP13.4□□□□□ -0.26
PTCD2-211ENST00000536805 EHD4Q9H223 541 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 RBM12Q9NTZ6 932 aaKnown RBP13.4□□□□□ -0.26
PTCD2-211ENST00000536805 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTCD2-211ENST00000536805 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 MYH10P35580 1976 aa13.4□□□□□ -0.26
PTCD2-211ENST00000536805 MATR3P43243 847 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 NONOQ15233 471 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 KLHDC7AQ5VTJ3 777 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 UNC13DQ70J99 1090 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 HEATR3Q7Z4Q2 680 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 IQCKQ8N0W5 287 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 CALML4Q96GE6 196 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 IL17RBQ9NRM6 502 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 FAM207AQ9NSI2 230 aaPredicted RBP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 NDUFAB1O14561 156 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 TFAP4Q01664 338 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 SLC35G1Q2M3R5 365 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 CFAP58Q5T655 872 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 MICALCLQ6ZW33 695 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 RRAGAQ7L523 313 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 EEF2KMTQ96G04 330 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 MMRN2Q9H8L6 949 aa13.39□□□□□ -0.27
PTCD2-211ENST00000536805 LUC7LQ9NQ29 371 aaKnown RBP13.39□□□□□ -0.27
PTCD2-211ENST00000536805 ROBO1Q9Y6N7 1651 aa13.38□□□□□ -0.27
PTCD2-211ENST00000536805 PALM3A6NDB9 673 aaPredicted RBP13.38□□□□□ -0.27
PTCD2-211ENST00000536805 NKRFO15226 690 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTCD2-211ENST00000536805 NCK2O43639 380 aa13.38□□□□□ -0.27
PTCD2-211ENST00000536805 CYTH3O43739 400 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms