RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ALPK3Q96L96 1907 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PIK3CDO00329 1044 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 TFRCP02786 760 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PTGS1P23219 599 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 UBE2SQ16763 222 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CCDC144BQ3MJ40 725 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 TMEM63BQ5T3F8 832 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 FCHSD1Q86WN1 690 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 NECAB1Q8N987 351 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 IL31RAQ8NI17 732 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 UPF2Q9HAU5 1272 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PXMP2Q9NR77 195 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 FRMPD4Q14CM0 1322 aa13.04□□□□□ -0.32
TNFRSF1A-208ENST00000536194 hCG_1984214I3L0E3 225 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MSCO60682 206 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 AKR1A1P14550 325 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 NAPAP54920 295 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 RABEP1Q15276 862 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ARHGEF16Q5VV41 709 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ZNF713Q8N859 430 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 DIS3LQ8TF46 1054 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 GTF3C6Q969F1 213 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 AIFM3Q96NN9 605 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PSTPIP2Q9H939 334 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-208ENST00000536194 DOCK5Q9H7D0 1870 aa13.02□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CPLX1O14810 134 aa13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 NR3C2P08235 984 aa13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PDE4DQ08499 809 aa13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PGM5Q15124 567 aa13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 GJC2Q5T442 439 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 IWS1Q96ST2 819 aa13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 FAM184BQ9ULE4 1060 aa13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-208ENST00000536194 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ESYT2A0FGR8 921 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 MYADML2A6NDP7 307 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SMCO2A6NFE2 343 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ADAMTS4O75173 837 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 RGS20O76081 388 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 FARP2O94887 1054 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ARIH2O95376 493 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PGK1P00558 417 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 RARBP10826 455 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SMPD1P17405 629 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CLK2P49760 499 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CUL5Q93034 780 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ZMYND12Q9H0C1 365 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 XPNPEP3Q9NQH7 507 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 VPS54Q9P1Q0 977 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 RBM27Q9P2N5 1060 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
TNFRSF1A-208ENST00000536194 STK36Q9NRP7 1315 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CTAGE5O15320 804 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 DUSP11O75319 330 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 DEXIO95424 95 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 FDPSP14324 419 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ADCY7P51828 1080 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 MRPS9P82933 396 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TNFAIP2Q03169 654 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 LRRC41Q15345 812 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 STXBP2Q15833 593 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 VSIG10LQ86VR7 867 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TRIM22Q8IYM9 498 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 ANKLE1Q8NAG6 615 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 PGBD1Q96JS3 809 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 UPF3AQ9H1J1 476 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 TMEM260Q9NX78 707 aa13□□□□□ -0.33
TNFRSF1A-208ENST00000536194 B4DLN1 442 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 DNM1LO00429 736 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 JAK2O60674 1132 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 COL6A1P12109 1028 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 CAPN2P17655 700 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 MRPL12P52815 198 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 NPY5RQ15761 445 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
TNFRSF1A-208ENST00000536194 IQSEC1Q6DN90 963 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms